Gene MADE_03307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03307 
Symbol 
ID6778592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3568927 
End bp3569472 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID642756755 
Productsuperoxide dismutase, Cu-Zn 
Protein accessionYP_002127593 
Protein GI196158104 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00782096 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC GTTTATTATC TACCCTAGCA GGGTCTATCT CACTGATTCT AAGTGCAGGC 
AGCTTAGCAG GTCATCACCA ACACGAAGGA AAAGAGGTGG TGATGAATAA CCTTAAAACC
AACCAGAGCA TGGGTACTGT AAAGGTAAGC AGTTACGACG ATGATGGTGT GGTTTTTACG
CCTAACCTTT CCGGTTTAAC GCCGGGTATA CACGGGTTTC ATGTTCATCA AAATGGTGAT
TGCTCAACGG CTATGAAAGA CGGTAAAAAA ATACTTGGTG GTGCTGCCGG CGGACACTTC
GACCCAGAAG ATACCAATAA ACACAGAGCT CCATGGTCTG AGAAAGGGCA CGAAGGCGAT
CTTCCCGTGC TGTATGTTGA TGAAAACGGA AAAGCCACGC AGCCTATTTT CGCCCCAGAG
CTAGAGCTTG AAGATATTGA AGGTCGTGCA CTTATGATTC ACGCAGGCGG CGACAACTAC
TCAGACTCCC CTAAAAAACT AGGTGGTGGC GGCGAACGCG TTGCTTGTGG CCTAATCGGT
AAATAG
 
Protein sequence
MKKRLLSTLA GSISLILSAG SLAGHHQHEG KEVVMNNLKT NQSMGTVKVS SYDDDGVVFT 
PNLSGLTPGI HGFHVHQNGD CSTAMKDGKK ILGGAAGGHF DPEDTNKHRA PWSEKGHEGD
LPVLYVDENG KATQPIFAPE LELEDIEGRA LMIHAGGDNY SDSPKKLGGG GERVACGLIG
K