Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03307 |
Symbol | |
ID | 6778592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3568927 |
End bp | 3569472 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756755 |
Product | superoxide dismutase, Cu-Zn |
Protein accession | YP_002127593 |
Protein GI | 196158104 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00782096 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC GTTTATTATC TACCCTAGCA GGGTCTATCT CACTGATTCT AAGTGCAGGC AGCTTAGCAG GTCATCACCA ACACGAAGGA AAAGAGGTGG TGATGAATAA CCTTAAAACC AACCAGAGCA TGGGTACTGT AAAGGTAAGC AGTTACGACG ATGATGGTGT GGTTTTTACG CCTAACCTTT CCGGTTTAAC GCCGGGTATA CACGGGTTTC ATGTTCATCA AAATGGTGAT TGCTCAACGG CTATGAAAGA CGGTAAAAAA ATACTTGGTG GTGCTGCCGG CGGACACTTC GACCCAGAAG ATACCAATAA ACACAGAGCT CCATGGTCTG AGAAAGGGCA CGAAGGCGAT CTTCCCGTGC TGTATGTTGA TGAAAACGGA AAAGCCACGC AGCCTATTTT CGCCCCAGAG CTAGAGCTTG AAGATATTGA AGGTCGTGCA CTTATGATTC ACGCAGGCGG CGACAACTAC TCAGACTCCC CTAAAAAACT AGGTGGTGGC GGCGAACGCG TTGCTTGTGG CCTAATCGGT AAATAG
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Protein sequence | MKKRLLSTLA GSISLILSAG SLAGHHQHEG KEVVMNNLKT NQSMGTVKVS SYDDDGVVFT PNLSGLTPGI HGFHVHQNGD CSTAMKDGKK ILGGAAGGHF DPEDTNKHRA PWSEKGHEGD LPVLYVDENG KATQPIFAPE LELEDIEGRA LMIHAGGDNY SDSPKKLGGG GERVACGLIG K
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