| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03303 |
|---|
| Symbol | |
|---|
| ID | 6778547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3563493 |
|---|
| End bp | 3565535 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642756751 |
|---|
| Product | 2,4-dienoyl-CoA reductase |
|---|
| Protein accession | YP_002127589 |
|---|
| Protein GI | 196158100 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CCTCACCGCA GCCTTCGCCT TTTTACCCTA ACTTATTAGC CCCGCTAGAC
TTGGGCTTCA CCACACTGAA AAACCGCACG CTAATGGGCT CTATGCACTT GGGTCTGGAA
GAAGAAAAAG GCGGGTTTGA CAAGCTTGCG GCGTTTTACG CCGAGCGAGC TAAAGGAGGC
GCAGGTCTTA TCGTAACCGG TGGGATAAGC CCTAACATTT CAGGCTGGGT AGCCCCTTTT
GCCGGCAGAA TGACCCGCTC TCGTCATGCT AAAAAGCACC GCGTAATTAC CGATGCCGTG
CACCAAGAAG ACGGTAAAAT CTGTATGCAA ATACTGCATT CAGGTCGCTA CGGCTATCAC
CCTTTAGCGG TTTCTGCTTC GCCTATGAAA TCGCCTATCA CGCCATTTAA ACCTCGTGAG
CTTTCCTCTC GCGGCGTAAG AGGCACCATT AAAGATTACA TTAAGTGCTC AAGCCTTGCG
CAAAAGGCGG GGTACGATGG CGTTGAGATC ATGGGTTCTG AAGGCTACCT CATTAACCAG
TTTTTTTGTG AGCGCACCAA CCACAGAAAC GATGAGTGGG GCGGCAGTTT AGAAAATCGT
GCGCGTTTAG CCCTAGAGAT AGTAAAAGGC GTTCGTGAAA AAGTGGGCAC TAACTTCATT
ATAATCTATC GCTTGTCTAT GCTGGATTTG GTTGAAGGCG GGGCAAAGTG GGATGAGGTG
GTCTACTTAG CCAAAGAAAT TGAAAAGGCA GGGGCAACGC TTATTAATAC CGGCATTGGC
TGGCATGAAG CGCGAGTGCC AACAATTTCG ACTTCCGTAC CGCGCGCAGC GTTTACCTGG
ATCACCCAGC GTATGAAAAA GGAAGTGTCT ATTCCCCTTG TTACCACTAA CCGAATTAAT
ACTCCAGAGG TAGCAGAGTC GGTGTTGGCT GAAGGCCATG CTGACATGGT GTCGATGGCA
CGACCATTTC TTGCCGATGC ACATTTCGTT GCCAAGGCCA TGCGCAATGA ATCTAAGCTT
ATCAACACGT GTATTGCATG TAATCAGGCG TGCCTAGACC ATGCATTTGA ACAAAAACGT
GCTAGTTGCC TGGTAAACCC TCAGGCCTGC TATGAAACCG AACTGACCTT TACGCCTACC
CAAGCCAAGA AAAAGCTAGC GGTTGTAGGA GCTGGCCCTG CTGGGTTGGC GTTTTCTATG
TATGCCGCCG ACCGTGGGCA CGAGGTACAC CTATTTGATA AAGCGAGTGA AATTGGCGGC
CAGTTTAATT ATGCAAAACA AGTACCTGGC AAAGAAGAGT TTTACGAAAC TCTACGCTAT
TTCGATAACC AGCTAGCTCG CGTTGGCGTG ACGATTCATC TTAACCACGA GGTTAATGCT
GAAAGCCTTT TAAATATGGG CTTTGATGAA GTTGTGTTGG CAACAGGTAT AAACCCACGC
AAGCTGACAA TTGAAGGGCA CGATCACCGA AAAGTAATGA GTTACTTGGA TGTGCTTCGC
GACCATAAAC CGGTTGGAAA AAAAGTCGCA ATTATTGGTG CGGGCGGCAT AGGCTTTGAT
GTGGCCGAGT TCTTAGTTGA ACATGAGCAC TTGGCACAAG ACAAGGAAAA ATGGCTGGAC
CATTGGGGAA TCGATAAAGG TTATTCAGCG CCTGGCGCGC TAAAAGAAAA AGCCATAGAG
CCCTCTGAGC GTGAAGTGTA TTTACTACAA CGTAAGACCT CAAAAGTCGG AAAAGGACTT
GGCAAAACAA CGGGCTGGAT CCATCGTCAG TCATTGAAAC ATCACAATGT TCAAATGATA
AATGGCGTGA GCTACGAAAA GGTGGACGAT GAAGGTCTAC ACGTCTTTAT TAACGACGCG
CCGAAGGTGT TGCCTGTAGA CAATATTATC GTGTGTGCAG GGCAAGAGCC CTTTAAGCCA
CTACAGCAAC CGCTTGAAGA GGCTGGCGTA AGTGTTCACA TTATTGGCGG TGCCGACGTA
GCGGCTGAAC TCGACGCTAA ACGGGCTATT CGCCAAGGCG CTGAGCTAGC AGCCCGAATC
TAG
|
|---|
| Protein sequence | MSTPSPQPSP FYPNLLAPLD LGFTTLKNRT LMGSMHLGLE EEKGGFDKLA AFYAERAKGG
AGLIVTGGIS PNISGWVAPF AGRMTRSRHA KKHRVITDAV HQEDGKICMQ ILHSGRYGYH
PLAVSASPMK SPITPFKPRE LSSRGVRGTI KDYIKCSSLA QKAGYDGVEI MGSEGYLINQ
FFCERTNHRN DEWGGSLENR ARLALEIVKG VREKVGTNFI IIYRLSMLDL VEGGAKWDEV
VYLAKEIEKA GATLINTGIG WHEARVPTIS TSVPRAAFTW ITQRMKKEVS IPLVTTNRIN
TPEVAESVLA EGHADMVSMA RPFLADAHFV AKAMRNESKL INTCIACNQA CLDHAFEQKR
ASCLVNPQAC YETELTFTPT QAKKKLAVVG AGPAGLAFSM YAADRGHEVH LFDKASEIGG
QFNYAKQVPG KEEFYETLRY FDNQLARVGV TIHLNHEVNA ESLLNMGFDE VVLATGINPR
KLTIEGHDHR KVMSYLDVLR DHKPVGKKVA IIGAGGIGFD VAEFLVEHEH LAQDKEKWLD
HWGIDKGYSA PGALKEKAIE PSEREVYLLQ RKTSKVGKGL GKTTGWIHRQ SLKHHNVQMI
NGVSYEKVDD EGLHVFINDA PKVLPVDNII VCAGQEPFKP LQQPLEEAGV SVHIIGGADV
AAELDAKRAI RQGAELAARI
|
|---|
| |