| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03297 |
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| Symbol | |
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| ID | 6778576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3559482 |
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| End bp | 3560531 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756745 |
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| Product | twitching motility protein PilT |
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| Protein accession | YP_002127583 |
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| Protein GI | 196158094 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.987753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGTGG ATATTACCGA ACTTTTGGCT TTCAGTGTTA AGAATAACGC CTCAGATTTA
CACTTATCAG CGGGCCTACC ACCAATTATT CGTGTAGATG GCGAGATGCG TAAACTGAAC
GTGCCTGCCC TCGATCACAA GCAAGTACAT AGTCTCGTTT ACGAGATTAT GAACGACATG
CAGCGCAAAG AATACGAAGA AAACTTAGAA ACCGATTTTT CTTTTGAAGT GAATGGGTTA
TCTCGTTTTC GTGTCAATGC CTTTGTTCAG AACCGCGGTG CCGCCGCTGT TCTGCGTACT
ATCCCCAGCA AAGTATTAAC GTTAGACGAC CTTGGTGCCC CGGAAATATT TAAAGAGATC
ATCAATCAGC CTACAGGTAT TGTGCTGGTA ACCGGTGCCA CAGGTTCGGG TAAAAGTACT
ACCTTGGCGG CCATGGTCGA CCATATTAAT ACGCACAAAC GCGAACATAT TCTGACCATT
GAAGACCCCA TCGAATTCGT GCACGACAAT AAGCTCAGTT TGGTAAACCA GCGTGAAGTG
CATCGCGATA CCCACTCTTT TAACAATGCA TTGCGTTCCG CGTTACGTGA AGACCCAGAC
GTTATTCTTG TCGGTGAGCT GCGTGACCTC GAAACCATTC GCCTTGCTAT CTCGGCCGCG
GAAACAGGTC ACTTAGTATT TGGTACGCTA CATACTAACT CAGCGCCTAA AACTATTGAC
CGGATTATTG ACGTTTTTCC TGCAGAAGAA AAAGCCATGG TGCGCTCTAT GTTATCTGAG
TCTTTACGCG CGGTTATTTC TCAAACACTG CTAAAGAAAG TAGGGGGAGG CCGAGTGGCG
GCTCACGAAA TCATGGTAGG TATCCCAGCT ATTCGTAACC TCATTCGCGA AGATAAAGTG
CCTCAGATGT ATTCGGTTAT CCAAACCGGT CAGGCCCACG GTATGCAAAC CATGGATCAG
TGCTTACAGC GCCTGGTCGC CATGGGAGTT ATAAGTAAAG AAGACGCGGC TGCAAAGTCA
GTGGATAAAC AGTCGATGAA CAATTTCTAG
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| Protein sequence | MVVDITELLA FSVKNNASDL HLSAGLPPII RVDGEMRKLN VPALDHKQVH SLVYEIMNDM
QRKEYEENLE TDFSFEVNGL SRFRVNAFVQ NRGAAAVLRT IPSKVLTLDD LGAPEIFKEI
INQPTGIVLV TGATGSGKST TLAAMVDHIN THKREHILTI EDPIEFVHDN KLSLVNQREV
HRDTHSFNNA LRSALREDPD VILVGELRDL ETIRLAISAA ETGHLVFGTL HTNSAPKTID
RIIDVFPAEE KAMVRSMLSE SLRAVISQTL LKKVGGGRVA AHEIMVGIPA IRNLIREDKV
PQMYSVIQTG QAHGMQTMDQ CLQRLVAMGV ISKEDAAAKS VDKQSMNNF
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