Gene MADE_03289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03289 
Symbol 
ID6778507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3552425 
End bp3553192 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content49% 
IMG OID642756737 
ProductZn-dependent protease with chaperone function 
Protein accessionYP_002127575 
Protein GI196158086 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAG CGCTCACGTT AACAGCTTGC GCAACCTCAC CGACGGGAAG AAACCAAGTA 
CTACTTTATT CTGAAAGCCA ATTGGCGCAA ATGGGCGATC AAGCTTTCAC AGGTATGAAA
GAAGAGTTAA AAATTTCAAA TAAGGCCGTG CAAAACTCTT ACGTAGAATG CGTTGCAAAC
GCGATTACCG CGCAAGTTCC GGCGAGTGTT TTTAACGGGC AATGGGAAGT CGTTGTTTTT
GATGATGAAC AAGTGAACGC GTTCGCACTG CCTGGCGGTA AAATTGGCGT GTACACCGGG
TTGTTGAAAG TCGCTGAGAA TCAGCATCAA CTTGCCGCGG TTATTGGTCA CGAAGTAGGC
CACGTTATCG CTGAGCACGG TAACGAACGT ATGTCTCAAT CTACCCTAAT AAACGTGGGC
AGCCAAGCTG TTGGCCAAGT GCTTGCGGCG AACGAAGTCC CCCAATCTGG CCCGATAATG
GCGGCGATAG GCTTAGGTGT TCAAGTTGGT GTTCAACTTC CTTTTAGCAG GACTCATGAA
TCGGAAGCAG ACGTTATCGG TTTACAACTC ATGGCAAAAT CGGGGTTTGA CCCAAGACAA
TCTGTTAACT TGTGGCAGAA TATGGATGCA GCGAGTAGCG GCGACCGCCC TATGGAACTC
TTATCCACTC ACCCCGCGCC ACAAACCCGT ATAGATAACT TGCAAGCAAA TATGCCTGAC
GCGTACGCCG ATTATCAAGC AACGGCGTAT AGACCAAACT GCCGATAG
 
Protein sequence
MAAALTLTAC ATSPTGRNQV LLYSESQLAQ MGDQAFTGMK EELKISNKAV QNSYVECVAN 
AITAQVPASV FNGQWEVVVF DDEQVNAFAL PGGKIGVYTG LLKVAENQHQ LAAVIGHEVG
HVIAEHGNER MSQSTLINVG SQAVGQVLAA NEVPQSGPIM AAIGLGVQVG VQLPFSRTHE
SEADVIGLQL MAKSGFDPRQ SVNLWQNMDA ASSGDRPMEL LSTHPAPQTR IDNLQANMPD
AYADYQATAY RPNCR