Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03289 |
Symbol | |
ID | 6778507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3552425 |
End bp | 3553192 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642756737 |
Product | Zn-dependent protease with chaperone function |
Protein accession | YP_002127575 |
Protein GI | 196158086 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGCAG CGCTCACGTT AACAGCTTGC GCAACCTCAC CGACGGGAAG AAACCAAGTA CTACTTTATT CTGAAAGCCA ATTGGCGCAA ATGGGCGATC AAGCTTTCAC AGGTATGAAA GAAGAGTTAA AAATTTCAAA TAAGGCCGTG CAAAACTCTT ACGTAGAATG CGTTGCAAAC GCGATTACCG CGCAAGTTCC GGCGAGTGTT TTTAACGGGC AATGGGAAGT CGTTGTTTTT GATGATGAAC AAGTGAACGC GTTCGCACTG CCTGGCGGTA AAATTGGCGT GTACACCGGG TTGTTGAAAG TCGCTGAGAA TCAGCATCAA CTTGCCGCGG TTATTGGTCA CGAAGTAGGC CACGTTATCG CTGAGCACGG TAACGAACGT ATGTCTCAAT CTACCCTAAT AAACGTGGGC AGCCAAGCTG TTGGCCAAGT GCTTGCGGCG AACGAAGTCC CCCAATCTGG CCCGATAATG GCGGCGATAG GCTTAGGTGT TCAAGTTGGT GTTCAACTTC CTTTTAGCAG GACTCATGAA TCGGAAGCAG ACGTTATCGG TTTACAACTC ATGGCAAAAT CGGGGTTTGA CCCAAGACAA TCTGTTAACT TGTGGCAGAA TATGGATGCA GCGAGTAGCG GCGACCGCCC TATGGAACTC TTATCCACTC ACCCCGCGCC ACAAACCCGT ATAGATAACT TGCAAGCAAA TATGCCTGAC GCGTACGCCG ATTATCAAGC AACGGCGTAT AGACCAAACT GCCGATAG
|
Protein sequence | MAAALTLTAC ATSPTGRNQV LLYSESQLAQ MGDQAFTGMK EELKISNKAV QNSYVECVAN AITAQVPASV FNGQWEVVVF DDEQVNAFAL PGGKIGVYTG LLKVAENQHQ LAAVIGHEVG HVIAEHGNER MSQSTLINVG SQAVGQVLAA NEVPQSGPIM AAIGLGVQVG VQLPFSRTHE SEADVIGLQL MAKSGFDPRQ SVNLWQNMDA ASSGDRPMEL LSTHPAPQTR IDNLQANMPD AYADYQATAY RPNCR
|
| |