Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03263 |
Symbol | |
ID | 6777025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3524987 |
End bp | 3526534 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642756713 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase |
Protein accession | YP_002127551 |
Protein GI | 196158062 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.585417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGTTA GTGCCTTTAT TCAAAGTACC AAAGCATTGC TGGCGAAGTT TGGTGTAGAC GCACCGGATA TACGTATTGA AGGCCTTACT TTAGATAGCC GCGAAGTGAA CACGCGGTTA GCTTTTTTAG CCATTAAAGG GCATGAGCGC GACGGCCGTG ATTTTATCCC TCAGGCAATA AGTTTAGGGG CCCGTGTAAT TCTGGCGCAA ACTGACGACA GTGAAGCTCA TGGCCAAATG GAAATGCGCG ACCACAGCGT TATCATTTCT CTTTATGAGC TACCCCAAAT GCTCTCTGCA TTAGCTGCAG CCTTTTATGA CTATCCCGCA CAAAAGATGA CAACGGTAGC GGTTACTGGA ACTAACGGAA AAACCTCTAC AGTTCAATTG CTTACGCAAC TTAAAGACGC GTTAGGTACG CGTAGTGCAA GCATAGGTAC CCTAGGTAGC AGTGTGTTTG AAGGCGATGC GACGCAATGG TCGAACACGC CTGCGGCCAA TACCACGCCA GATGCCATAC GTATGCAGTA CTTGTTGGCA GACTTTGTGC AAAGCGAAGT GCGCCATGCC GCCTTTGAGG CCAGTTCTCA CGCGTTGGTT CAGGGGCGAC TTGGTACGGT TAAAACCGAT ATAGCTGTTT TCACCAACCT TACACGGGAT CATCTCGATT ATCACGGCAC GATGGAGGAA TACGGTAAGG CTAAGCGCTT ACTGCTTTGT CAGCCTGGGT TAAAAGCGGT GGTGTTAAAC GCTAACGATG ATGAAAGTAA TAAATGGGAC AATGTTGCTG ACAATGCTAT TACCCGCATT TGGACGGGTA TTGATGAAAG TGCTGATGGT GCGTTATTTC GCGCCCACAA CAATCCTCAA AGTCGCCATT GTTTCGCCAC AAATGCTTCT TATCATTCCG GTGGATGTAG CTTTGAACTG GTGAGCTCGT GGGGAAGTGC CGCCATTTCC CTACCGCTTT TCGGTAAATT CAATATTAGT AATGTGCTAA GCGCAATAGG AACACTTCTG GCAGAAGGTG AGCGTTTTGA CGCGGTGGTA AAAGCGGTTA ATGCGATCAC CCCTGTGCCA GGGCGAATGG AAGTGTTTCC AGTACCCGGT GCTGCCAATT TGGTGGTGGA CTACGCCCAC ACCCCTGACG CACTGGAAAA GGTGCTGCTA AGCGCCAAGT TTCATACCGC TGGAAAAGTG TGGTGTGTAT TTGGTTGTGG CGGTGATAGA GACACAGGAA AGCGCCCATT AATGGGGCAG GCTGCTGAAG CTGGCGCTGA TGCCATTGTT ATCACCACTG ATAACAGCCG TAGCGAAGAC CCTGAATCTA TCGCGCAGGA CATTATTACC GGTTTAAAAG ACAGTAGCCT TGCGGTGTCA ATTCCTGACA GAGAGCAAGC TATTCGTCAT TGCCTAGCGC ATGCTGATAA AAGCGACATC ATCATTGTGG CCGGAAAAGG CCATGAAGAT TACCAAATTA TCGGTGACAA AAAGACTAAC TATAACGAAC GTGCGGTTGT GGCGCGGCTG CAACAGGAGT ACAGCTAA
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Protein sequence | MVVSAFIQST KALLAKFGVD APDIRIEGLT LDSREVNTRL AFLAIKGHER DGRDFIPQAI SLGARVILAQ TDDSEAHGQM EMRDHSVIIS LYELPQMLSA LAAAFYDYPA QKMTTVAVTG TNGKTSTVQL LTQLKDALGT RSASIGTLGS SVFEGDATQW SNTPAANTTP DAIRMQYLLA DFVQSEVRHA AFEASSHALV QGRLGTVKTD IAVFTNLTRD HLDYHGTMEE YGKAKRLLLC QPGLKAVVLN ANDDESNKWD NVADNAITRI WTGIDESADG ALFRAHNNPQ SRHCFATNAS YHSGGCSFEL VSSWGSAAIS LPLFGKFNIS NVLSAIGTLL AEGERFDAVV KAVNAITPVP GRMEVFPVPG AANLVVDYAH TPDALEKVLL SAKFHTAGKV WCVFGCGGDR DTGKRPLMGQ AAEAGADAIV ITTDNSRSED PESIAQDIIT GLKDSSLAVS IPDREQAIRH CLAHADKSDI IIVAGKGHED YQIIGDKKTN YNERAVVARL QQEYS
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