Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03256 |
Symbol | ddl |
ID | 6777096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3516130 |
End bp | 3517098 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756706 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_002127544 |
Protein GI | 196158055 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.130136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC CTTCAGTAAG TACACACTCA CCTGAAAAGT ATGGGAAAGT AGCTGTACTT TTAGGTGGTG ACTCGGCCGA GCGTGAAGTA TCGCTAAATT CGGGGAATGC GGTGCTAAAC GCACTGTTAA GACAAGGGGT AAATGCATTT GCCTTTGACC CCGCAGAGCG CCCACTTAAC GATTTGCTGT CGCTAGATGT TGATAGAGCC CTCATTATGC TTCACGGTCG TGGCGGTGAA GATGGCGCTA TGCAGGGGGC TCTTCAGTTT TTAAAAATAC CCTACACGGG AAGCCGAGTT TTAGGCTCTG CGCTGGCAAT GGATAAAATT CATACTAAGC AAGTGTGGCA AAGTTTAGGT TTACCCACTG CAAAATATGA AATTGCTGAT AAAAGGCACT TTGAAGCTGG TAAGTGCAGC GCTATAATGG ATAAATTGGG GAATGAAGTC ATGGTAAAAC CGGCCAGAGA AGGGTCGAGT ATTGGCATGG CAAGAGTGAC AAGCGCTAAA CAACTCGAAA CTGCCATTCA GGACGCTTTT AAATACGATA ATCAAGTCCT GTTAGAGCAG TATATAGACG GCCCCGAATT CACTGTTTCT GTGATACAGG GGCAGGCGTT GCCGTCTATT CGCATGTCTA CTCCACATAC ATTCTATGAT TATGCTGCGA AATATCAGGA TAATACAACA GAATACTATT GCCCAAGCGG TTTGTCTGAA GAGCAAGAAG CACAGCTTGC AAAGTTAGCT TCTCGTGCGT TTGATGCTAT TTCAGGCAGC GGTTGGGGCA GAATTGATGT TATGCAGGAC AATCAAAGGC AGTTTTATTT GCTAGAGGCA AATACAGTGC CTGGCATGAC AGAAAAAAGT TTGGTGCCTA AAGCGGCCAA AGTTGCAGGC TTAACGTTTG ACGAGTTGGT GTTGAGTATT CTTTCGACCA GCTTTGATGA TGTTGCAAAT AAGGCGTAG
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Protein sequence | MFKPSVSTHS PEKYGKVAVL LGGDSAEREV SLNSGNAVLN ALLRQGVNAF AFDPAERPLN DLLSLDVDRA LIMLHGRGGE DGAMQGALQF LKIPYTGSRV LGSALAMDKI HTKQVWQSLG LPTAKYEIAD KRHFEAGKCS AIMDKLGNEV MVKPAREGSS IGMARVTSAK QLETAIQDAF KYDNQVLLEQ YIDGPEFTVS VIQGQALPSI RMSTPHTFYD YAAKYQDNTT EYYCPSGLSE EQEAQLAKLA SRAFDAISGS GWGRIDVMQD NQRQFYLLEA NTVPGMTEKS LVPKAAKVAG LTFDELVLSI LSTSFDDVAN KA
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