Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03251 |
Symbol | |
ID | 6777093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3511313 |
End bp | 3512191 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756701 |
Product | peptidase, M23/M37 family protein |
Protein accession | YP_002127539 |
Protein GI | 196158050 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00183313 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAA CTATTACATT GGCTGGTAAA AATAAACGTT ACAGACACAG CATTCGTGTC CGTACGCTTG TTAGTGCTAC CGTGTTATCG TCAATTTTTA TGTTAGTGTC GAGCCGTTCT ACCGAATCGG TATCCGAAGA TATTGCTCGT GTGCGTTTAG CCCAAACAGA AGTCAACGAA CAACAAAAAG ATGTTGAGGC GCTAAAGCAA CAAACCTCCG TAAAGATAAA AGCCTTACTT TCTCACGTTG CTGAACTTTC AGCACAAGTT ACATTGCTAG ATGAGAAAGG TAAGCAAATA GCAACAGAAT TAGGTATGTC AGCGGCTGAC CTGGACGCTT TCGTGCCGGT ATCGATACCG GATAACCTTC AAGAAGATCC CATCCTTAAC GAAATAGCTA AACTAGAGCA ATCTCTCGAT TTGAAGTCTC AACAGTTATC TATGCTTGAA AGTTTGGTTA GGGGTCACCA TATAAACGAA CAGAGCCAAT TATCTGGTCG TCCCATTGAG TCAGGATGGT TGTCTTCTTA TTACGGTATG CGGGCCGACC CGTTTACCGG CAAATCAGCC ATGCATAAGG GTTTAGACTT CGCCGGTAAA GCAGGGGAGA ACGTAGTCGC CACAGCAGCA GGTATAGTGA CCTGGGCAGG CGAACGCTAC GGTTATGGCC AGCTAGTCGA AATTGATCAC GGTGATGGTT TTGTTACCCG ATATGGGCAT AACGACTCCC TTACTGTTTC AATCGGTGAT GTGGTCACTA AAGGTGAAGC TATCGCTAAA ATGGGCAACA CTGGGCGCTC AACCGGCGTG CATGTTCACT ACGAAGTAAT AAGAAACGGA AAACAAGTCG ATCCTCTGCC TTTTGTCTAT AAAAAGTAG
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Protein sequence | MKLTITLAGK NKRYRHSIRV RTLVSATVLS SIFMLVSSRS TESVSEDIAR VRLAQTEVNE QQKDVEALKQ QTSVKIKALL SHVAELSAQV TLLDEKGKQI ATELGMSAAD LDAFVPVSIP DNLQEDPILN EIAKLEQSLD LKSQQLSMLE SLVRGHHINE QSQLSGRPIE SGWLSSYYGM RADPFTGKSA MHKGLDFAGK AGENVVATAA GIVTWAGERY GYGQLVEIDH GDGFVTRYGH NDSLTVSIGD VVTKGEAIAK MGNTGRSTGV HVHYEVIRNG KQVDPLPFVY KK
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