Gene MADE_03233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03233 
Symbol 
ID6776899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3491726 
End bp3492619 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content46% 
IMG OID642756683 
ProductType 4 prepilin-like proteins leader peptide processing enzyme 
Protein accessionYP_002127521 
Protein GI196158032 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0166212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCTA TAATAACCCT TAGCCAGCTA TACCCCGCTA TATTCTATAC CCTTATCTTC 
TTAGTGAGCT TAATGGTTGG CAGCTTTTTA AATGTAGTGA TCTACCGCTT ACCCATTATG
ATGGAGCGCA GCTGGCAGCA GGAATACCAA AGCTATTTTA CCGACGGTGA TACCAGTTTA
GATACACCTA ACGCTCCATC GCAAGACGAT ACCTTTAACC TGGTAAAACC AGACAGCACC
TGCCCCAGCT GCGGCCACAA AATTCGCGCA TGGGAAAACA TTCCTGTTAT TAGTTACCTA
TTTCTAAAGG GCAAATGTGC TAAGTGCAAG GTAGCTATTT CAGTACGCTA TCCGCTGGTT
GAGCTTTTCA CTGCAATCGC CTGCACCTTC GCAGCCTATC AATTTGGTGC AACGCCTCAA
GCGCTTTGGG CCGTGGTTTT TACCTACGTA CTCGTGGCTT TGCTATTTAT CGATTTAGAT
AAAATGTTGT TGCCAGACCA GCTCACGCTC CCTTTGCTTT GGCTTGGGCT GCTGTTAAGT
ACTCAAAACA TTTTTGTTGG TACGACCGAC GCCATTATTG GCGCGACGGC AGGCTATTTA
AGCTTGTGGT CAGTATATTG GTTATTTAAG CTTGTTACGG GCAAGGAAGG CATGGGCTAT
GGCGATTTTA AATTGCTTGC CGCCTTAGGT GCGTTCACAG GCTGGCAAGG GCTCCCCGTT
ATCATCTTAC TTTCATCACT GGTGGGCGCC ATTGCAGGTA TTGCTATTAT GGTTGTGCAA
AATAAGGGGA AATCCTTAGC CATCCCCTTT GGCCCTTACC TTGCTGTAGC AGGGTGGCTT
ACGCTGCTTT TTAAAGCTGA AATTATCACT ACTTACCTTG ATTACGTGCT TTAA
 
Protein sequence
MDAIITLSQL YPAIFYTLIF LVSLMVGSFL NVVIYRLPIM MERSWQQEYQ SYFTDGDTSL 
DTPNAPSQDD TFNLVKPDST CPSCGHKIRA WENIPVISYL FLKGKCAKCK VAISVRYPLV
ELFTAIACTF AAYQFGATPQ ALWAVVFTYV LVALLFIDLD KMLLPDQLTL PLLWLGLLLS
TQNIFVGTTD AIIGATAGYL SLWSVYWLFK LVTGKEGMGY GDFKLLAALG AFTGWQGLPV
IILLSSLVGA IAGIAIMVVQ NKGKSLAIPF GPYLAVAGWL TLLFKAEIIT TYLDYVL