| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03231 |
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| Symbol | |
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| ID | 6778408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3489887 |
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| End bp | 3490312 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642756681 |
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| Product | type IV pilin |
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| Protein accession | YP_002127519 |
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| Protein GI | 196158030 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0578635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAACA TGAACACTAA AAACCAAAAA GGTTTTACCC TAATCGAACT AATGATAGTT
GTTGCAATTA TCGGTATTCT TGCAGCAATC GCATTGCCTG CTTATCAGAC TTACACTGCT
CGAGCGACAT ATAGCGAAGT AATCTCGGCA TCAAGTGCAG CTAAAACCGC TGTTGAAGTA
TGTGCTCAGA CGGGCGTACC TGCTGATTGT ACTGACATCG CGGTAAACGC AGGTTGGACT
AACGCATCAA CGGTTAATAC CATAGAGATA GGGGGAGATG CTGCTAACGG CTATACAATT
ACAGTAACTC CAAATGAAGA AAGCGGTATT GTAGCAGCAG ACACTCTAAT TCTAACCGGT
ACTATCAATA ATGGTGCGGT TACATGGGCA ACAACAGGTG GTTGTGTAGA TAAAGGCCTT
TGCTAA
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| Protein sequence | MMNMNTKNQK GFTLIELMIV VAIIGILAAI ALPAYQTYTA RATYSEVISA SSAAKTAVEV
CAQTGVPADC TDIAVNAGWT NASTVNTIEI GGDAANGYTI TVTPNEESGI VAADTLILTG
TINNGAVTWA TTGGCVDKGL C
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