Gene MADE_03228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03228 
Symbol 
ID6777033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3487247 
End bp3487783 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content50% 
IMG OID642756678 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_002127516 
Protein GI196158027 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCTTT ATAATCAAGC AATCTTCACC GAAAGCCCTC ATGCAGACCC TCGGCCTGAC 
AACACCGACG TCAGCCTTTT AGTTATACAC AATATTTCAT TGCCGCCATC ACAGTTTGGT
ACGCCTGGCA TTCGGGAATT GTTTACCGGA ACGCTCAACC CAGACGAGCA CCCTTTCTAT
AAAGAAATAG CGGGGCTGCG GGTGTCTGCG CACTGCGTTA TATACAGAAC GGGGGAGGTT
GAGCAGTTTG TTCCGTTCGA CCAGCGAGCA TGGCATGCCG GGCTGTCGTC GTTTCAAGGG
AAAAGCCGTT GCAACGACTT TTCCATTGGT ATTGAGCTAG AAGGTACAGA CACCTTGCCA
TTTACCGATG CGCAGTATCA CGCCTTAGGT GAACTAACTG ATTTTATTAC AAAGCGCTAT
CCTCGGATCA CTTTAGGGCG TATCGTAGGA CATAATGACA TTGCACCGGG GCGTAAAACC
GACCCGGGTG AAGCCTTCGA TTGGGCACGT TATAGAATGC GAATATCGCA AGCGTAA
 
Protein sequence
MVLYNQAIFT ESPHADPRPD NTDVSLLVIH NISLPPSQFG TPGIRELFTG TLNPDEHPFY 
KEIAGLRVSA HCVIYRTGEV EQFVPFDQRA WHAGLSSFQG KSRCNDFSIG IELEGTDTLP
FTDAQYHALG ELTDFITKRY PRITLGRIVG HNDIAPGRKT DPGEAFDWAR YRMRISQA