Gene MADE_03207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03207 
Symbol 
ID6778329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3465868 
End bp3466530 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID642756657 
Productribose-5-phosphate isomerase A 
Protein accessionYP_002127495 
Protein GI196158006 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.335569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGG ATCAGAACGC AAAGAAACAA GCCGTAGCCA AAGCAGCTAT CGACTACGTT 
GAATCAGACA GTATTGTCGG TGTGGGTACG GGTTCTACCG TGAATTTCTT TATTGAAGAG 
CTCGGTAAAA TTAAACACAA AATTGAAGGG GCAGTATCAA GCTCAGAAGC ATCAACAGCG 
CGTTTAAAAG CTTTGGGCAT TGAAGTATTT GCGCTAAACG AAGTAAGCAA CCTTTCTGTT 
TATATCGACG GTGCCGATGA AGTTACCGAA CACAAGCATA TGATTAAGGG GGGCGGTGCC 
GCACTTACTC GTGAAAAGAT TGTTGCAGGC GCTGCCACTA CGTTTGTTTG TATTGTAGAT 
GAAACTAAAC GGGTGCCAGT ACTGGGCGCA TTCCCCCTCC CTGTTGAAGT GATACCTATG 
GCCCGTTCTT TCGTAGCCCG TGAACTGGTT AAGCTTGGCG GCGACCCAGA GTACCGTCAG 
GGAGTGATCA CCGACAATGG CAACGTTATC TTGGATGTTC ATAACCTTGA GATACTTAAT 
CCACGGGAAC TAGAACAAAA GATAAATAAT ATTCCAGGCG TAGTGACTAA CGGCATTTTC 
GCTCTGCGCG GTGCCGATAT AGTGCTAAGT GCAACAGAAA ACGGTGTTGA GACCTTTAAG 
TAA
 
Protein sequence
MTMDQNAKKQ AVAKAAIDYV ESDSIVGVGT GSTVNFFIEE LGKIKHKIEG AVSSSEASTA 
RLKALGIEVF ALNEVSNLSV YIDGADEVTE HKHMIKGGGA ALTREKIVAG AATTFVCIVD 
ETKRVPVLGA FPLPVEVIPM ARSFVARELV KLGGDPEYRQ GVITDNGNVI LDVHNLEILN 
PRELEQKINN IPGVVTNGIF ALRGADIVLS ATENGVETFK