Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03197 |
Symbol | |
ID | 6778245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3456790 |
End bp | 3457062 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642756647 |
Product | phosphocarrier protein NPR |
Protein accession | YP_002127485 |
Protein GI | 196157996 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.789521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATTA AAAAAACGCT AACCATCGTA AATAAGCTGG GATTACATGC AAGAGCAGCG ACCCAATTAG TGAAGCTTGC CAATCAGTTC GACGCCAAAA TTATTTTAAA GAAAGGCGAT AAAGAGGCTG ACGCCAGCAG CGTTCTTGGT TTAATGATGC TGGAAAGCCA TCAAGGTGAA CAAGTAGATG TTATTGTAGA TGGAAACGAT GATGTTGACG CCCTTGCTGC CATTGAAGAG CTCATAGAAG GTAAGTTTAA CGAAGACGAA TAG
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Protein sequence | MTIKKTLTIV NKLGLHARAA TQLVKLANQF DAKIILKKGD KEADASSVLG LMMLESHQGE QVDVIVDGND DVDALAAIEE LIEGKFNEDE
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