Gene MADE_03197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03197 
Symbol 
ID6778245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3456790 
End bp3457062 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content41% 
IMG OID642756647 
Productphosphocarrier protein NPR 
Protein accessionYP_002127485 
Protein GI196157996 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.789521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTA AAAAAACGCT AACCATCGTA AATAAGCTGG GATTACATGC AAGAGCAGCG 
ACCCAATTAG TGAAGCTTGC CAATCAGTTC GACGCCAAAA TTATTTTAAA GAAAGGCGAT
AAAGAGGCTG ACGCCAGCAG CGTTCTTGGT TTAATGATGC TGGAAAGCCA TCAAGGTGAA
CAAGTAGATG TTATTGTAGA TGGAAACGAT GATGTTGACG CCCTTGCTGC CATTGAAGAG
CTCATAGAAG GTAAGTTTAA CGAAGACGAA TAG
 
Protein sequence
MTIKKTLTIV NKLGLHARAA TQLVKLANQF DAKIILKKGD KEADASSVLG LMMLESHQGE 
QVDVIVDGND DVDALAAIEE LIEGKFNEDE