Gene MADE_03194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03194 
Symbol 
ID6776980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3455112 
End bp3455399 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content40% 
IMG OID642756644 
Productribosomal subunit interface protein 
Protein accessionYP_002127482 
Protein GI196157993 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCA ACCTAACTGG TCATCATGTC GAAATCACCG ACTCTTTGCG TAATTATGTC 
GATACGAAGT TCAGCAAACT TGAACGTCAC TTTGATCACA TTTCTAATGT GCATGTCATC
CTGAACGTTG AAAAATTAAA TCAAAAAGCC GAAGCGACCG TTCATTTAAG TGGCGCTGAA
GTATTCGCAT CCTCAGAAAA TACCGACATG TATGCGGCGA TTGACAGCAT GGTTGATAAA
CTCGACCGGC AGGTAATCAA GCATAAGGAA AAACTGAAAA AACATTAG
 
Protein sequence
MQINLTGHHV EITDSLRNYV DTKFSKLERH FDHISNVHVI LNVEKLNQKA EATVHLSGAE 
VFASSENTDM YAAIDSMVDK LDRQVIKHKE KLKKH