| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03183 |
|---|
| Symbol | |
|---|
| ID | 6778276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3445788 |
|---|
| End bp | 3446441 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642756633 |
|---|
| Product | toluene tolerance family protein |
|---|
| Protein accession | YP_002127471 |
|---|
| Protein GI | 196157982 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGCAA TTGGCATCTT TATGATGTCT GTAGCGGGTG TAGCCAATGC ACAAGACGTG
AACGAGCAAA ACCCTTATGA ACTTGTTCAA GATGTGGCAA ACCGAACCTT TGACCGCATT
AAAGCTAACC AAGATGCAAT TAAAGCTGAC CCTGAAATGT TGCGTACTAT TATGCAAGAA
GAACTGGTTC CGCATATCGA TTACAAATTT GCCGCTTTCA TGGTGCTAGG CAAGCATTTT
AAGTCTGTGC CGCAGGAAAA AATGGGTGAG TACATTAGCG TATTTCGTCA GTATCTGGTA
ACAACGTATG CGGTAGCAAT GGGTTACTAC GATAACCAAG AAGTTATTTT TGAGCCTGAA
TCATCGTTTG ATGATAAAAA GTCGGTGACG GTACGCGCCG TGGTCCAAGA TCCAAAACGC
CCGGAAATTA AAATAGCGTT TAAAGTGCGC AAAGACAGCA AGACCAACGA ATGGAAAGCG
TATGACATGG TTGCTGAAGG TATCAGCATG CTTAACAGCA AACGCAGCGA GTTCGAGTCA
ATCCTGCGCC AAGAAGGCAT TGATGCTGTT ATTGCCCTAA TGCGCGAAAA AATTGGTAAG
CCTGTGGAGC TTAAGCAAGA CGAGCCTATC GAAATCAAGG GAGAGGCTGA ATGA
|
|---|
| Protein sequence | MVAIGIFMMS VAGVANAQDV NEQNPYELVQ DVANRTFDRI KANQDAIKAD PEMLRTIMQE
ELVPHIDYKF AAFMVLGKHF KSVPQEKMGE YISVFRQYLV TTYAVAMGYY DNQEVIFEPE
SSFDDKKSVT VRAVVQDPKR PEIKIAFKVR KDSKTNEWKA YDMVAEGISM LNSKRSEFES
ILRQEGIDAV IALMREKIGK PVELKQDEPI EIKGEAE
|
|---|
| |