| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03178 |
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| Symbol | |
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| ID | 6778189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3441142 |
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| End bp | 3442482 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642756628 |
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| Product | protease DO |
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| Protein accession | YP_002127466 |
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| Protein GI | 196157977 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0459704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGTCTG CCGTTGTTGT AAGTTCACTG GGCTTTACTG CTAGCACGCA GGCGGCGTTA
CCGTTCTTTT CTGATTCAAA AGATGAAGTG CCGTCTTTAG CGCCCATGCT CGAAGAAGCT
ACCCCTGCGG TAGTCAGTAT TGCAGTTGAG GGTACGCAGA CCTCACGTCA ACGCGTACCT
GAAATGTTTC GCTACTTCTT CGGCGCTCCC CAAGAGCAAG TTCAAGAGCG CCCCTTTAGA
GGCCTTGGCT CTGGCGTTAT CATCGATGCC GACAAGGGCT ATGTCGTTAC CAACAACCAC
GTAGTCGATA ACGCCGATGA AATTACCGTT AAGCTAACCG ACGGTCGCGA ATTTAAAGCG
AAAAAGCTGG GTTCTGATGA ACAAAGTGAC ATTGCGCTTC TAAAAATTGA ACCCGATGAC
TTAAAAGCCC TCCCCCTTGC CGATTCTGAT GGCCTGCGCG TAGGTGACTT TGTAGTGGCC
ATCGGCAACC CCTTTGGTCT TTCTCAAACC GTAACGTCGG GCATTGTAAG CGCCTTGGGC
CGTTCAGGTC TTAACATTGG CGGTTACGAA GATTTCATTC AAACAGATGC CGCCATTAAC
CGCGGAAATT CAGGTGGCGC ACTGGTTAAC CTTCACGGCG AATTGGTTGG TATCAACACC
GCTATTTTCG GCCCTAACGG CGGAAACGTA GGGATCGGTT TTGCCATCCC TGCCAATATG
ATGAAGAGTC TTGTTGACCA AATAGCTGAG TTTGGTGAAG TGCGTCGCGG CCTGCTCGGC
ATTCTGGGTA GCGATATTGA CGCAGGCCTA GCTGAAGCAA TGAATGCCGA AGTGAATATT
GGCGCATTCG TTAGCGAAGT TCAGCCAGAA TCAGCAGCAG AGAAAGCAGG CCTACAAGCG
GGTGACATCA TTACTGCCAT CAATGGCCGT CAACTTCACA GTTTCCAAGA GCTACGCGCG
AAAATCGCAA GCATGGGAGC AGGTGCTGAA GTTGAACTTA CCGTAATGCG TAAAGGTAAG
AAAATGAATG TTGATGTGGT GCTTGACGAT GCTACCGATA CTACGGTTAC GGCAGCGCAA
ATCCACCCGG CCCTTGAAGG TGCAACCCTT TCTAACGGAG CCGATGATGC AGGTAATGCA
GGTGTTGTAG TGTCTGATAT TGAACGCGGT GCGCCAGCGG CAAGAATTGG GCTACAGTCT
GATGACGTTA TCATTGGTGT TAACCGAGTG CGTACGTCTA CAGTGGCCGA GTTTAGAAAT
GCCCTTGATG AAGCTAAAGG CGTTATCGCG CTTAACGTGA AACGCGGAAA CTCTACTTTA
TACTTAGTTA TTAGGCAGTA G
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| Protein sequence | MASAVVVSSL GFTASTQAAL PFFSDSKDEV PSLAPMLEEA TPAVVSIAVE GTQTSRQRVP
EMFRYFFGAP QEQVQERPFR GLGSGVIIDA DKGYVVTNNH VVDNADEITV KLTDGREFKA
KKLGSDEQSD IALLKIEPDD LKALPLADSD GLRVGDFVVA IGNPFGLSQT VTSGIVSALG
RSGLNIGGYE DFIQTDAAIN RGNSGGALVN LHGELVGINT AIFGPNGGNV GIGFAIPANM
MKSLVDQIAE FGEVRRGLLG ILGSDIDAGL AEAMNAEVNI GAFVSEVQPE SAAEKAGLQA
GDIITAINGR QLHSFQELRA KIASMGAGAE VELTVMRKGK KMNVDVVLDD ATDTTVTAAQ
IHPALEGATL SNGADDAGNA GVVVSDIERG APAARIGLQS DDVIIGVNRV RTSTVAEFRN
ALDEAKGVIA LNVKRGNSTL YLVIRQ
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