| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03176 |
|---|
| Symbol | |
|---|
| ID | 6778162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3439242 |
|---|
| End bp | 3440339 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642756626 |
|---|
| Product | ATPase, AFG1 family protein |
|---|
| Protein accession | YP_002127464 |
|---|
| Protein GI | 196157975 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1485] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAT GGGAAAAATA TCAGCTAGAT CTTAAGTCGT CTGATTTTCA TTACGACGCG
GCACAAGAAA ATGCAGTAAA AGAACTTCAA CGTTTGTTTG ATGAACTAAC CCAGCCTGAA
AAGAAAATGA CGTGGCGGGT AAAGTTAAAA GCAGCATTTG GTAAAGGCCA TGCAAAACAG
GGCATACAAG GTATTTACTT TTATGGTGGT GTAGGGCGAG GCAAAACCTA TTTGGTGGAT
ACCTTCTACG ACTGCTTACC GTTTGAAAAG AAAATGCGTG TGCATTTTCA CCGCTTTATG
TACCGCGTTC ATGACGAGCT CAAACAGCTT AAAAACGCCC AAGACCCGCT GAAGCTAGTA
GCTGAAAAAT TAGCAAAAGA AGCGCGAGTG ATATGCTTTG ACGAGTTTTT CGTGTCAGAC
ATTACCGATG CCATGATTTT AGGCACGCTA ATGGAAGAGT TGTTTGGCCA TGGTATCGTG
CTGGTGGCAA CGTCGAACAT AGTACCCGAT GACTTGTATA AAAACGGGCT ACAACGTGCG
CGATTCTTAC CAGCAATTGA CCTGCTCAAC CAAAACACTC GGGTGGTGAA CGTAGACAGC
GGTATTGATT ATCGTCTAAG AACCTTAGAA CAAGCTGAAA TTTATCATTA CCCACTTGAT
GAAGAAGCCA CCGAGAACCT GCATAGCTAT TTTGCACAGC TAGCGCCAGA GGAAGGGTCG
AAGGACGAAG ATATTGAAGT AAATAACCGC AAAATTAGTA CCCTGAGAAA TGCTGACGGC
GTGCTTATGA TTGATTTTAA TGCGCTATGC GGTGGGCCTC GAAGCCAAAG TGACTATATT
GAACTAAGCC GTTGCTATCA CTCGGTATTG CTCGCCAATG TAAAAGAGAT GGGGCAACAC
AATGACGATG TAGCAAGACG CTTTATCGCC ATGGTAGATG AATTCTACGA ACGCAATGTA
AAACTGATAA TATCCGCAGA AGTTGCACTT GAAAGCCTTT ATACAGAGGG CTTGCTCAAC
TTTGAATTCA GGCGATGCTT GAGCCGATTA AAAGAAATGC AGTCCCACGA TTACCTAGCC
ACAGAGCACT TGCCATAG
|
|---|
| Protein sequence | MTPWEKYQLD LKSSDFHYDA AQENAVKELQ RLFDELTQPE KKMTWRVKLK AAFGKGHAKQ
GIQGIYFYGG VGRGKTYLVD TFYDCLPFEK KMRVHFHRFM YRVHDELKQL KNAQDPLKLV
AEKLAKEARV ICFDEFFVSD ITDAMILGTL MEELFGHGIV LVATSNIVPD DLYKNGLQRA
RFLPAIDLLN QNTRVVNVDS GIDYRLRTLE QAEIYHYPLD EEATENLHSY FAQLAPEEGS
KDEDIEVNNR KISTLRNADG VLMIDFNALC GGPRSQSDYI ELSRCYHSVL LANVKEMGQH
NDDVARRFIA MVDEFYERNV KLIISAEVAL ESLYTEGLLN FEFRRCLSRL KEMQSHDYLA
TEHLP
|
|---|
| |