Gene MADE_03170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03170 
Symbol 
ID6776843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3431664 
End bp3433121 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content47% 
IMG OID642756620 
Productcell volume regulation protein CvrA 
Protein accessionYP_002127458 
Protein GI196157969 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCAG TTGATCACAT TATTTTACTT AGTGCAGTGC TGGCCATTCT AGGCGTGCTG 
GCCAGTAAAT TGTCTCCGCG CTTTGGTGTA CCTGTTTTGG TGTTATTCCT TGGTGTAGGT
ATGCTGGCTG GTGAAGATGG GATTGGGCGT ATCTTCTTTG ATAATGCCGA TGCTGCGCAC
GCTATAGGTA CGTTCGCGCT TATTCTTATC CTTTTTGACG GCGGCCTGCA AACCTCAAAA
AGATCGATTG TTCAGGCGTG GAAACCGGCT GCGCTACTGG CAACTTTTGG TGTTATCGGT
ACCGCTACAT TAACCGGTCT GTCCGCTATG ATTATACTCG ATTTACCGTT ATACAAAGGC
TTGTTGCTGG GGGCTATTGT AGGCTCTACC GATGCCGCCG CCGTATTTTC AGTATTGCGA
AATGCAGGTA TTCGCATACC GACTAAAATA AAATCTACCT TAGAATTAGA AAGTGCCTCA
AACGATCCCA TGGCTATCTT TCTTACCATA GGTCTTATTA CCCTCATTCA AGATAGCACC
ACCAACCCTC TGGATTTGGC CTCTTTATTT GCCAGTCAAA TGGGGGTGGG TGCTTTCGTG
GGTATTGCTA TCGGCGGTAT TGCCGTGTGG CTCTTTAGAC GAGTTACACT CATGGCGATA
GGGTTGTACC CGGTGTTTGT GATGCTGTTT GGTGTGTTGT CTTTTGGCCT AGCTGCAAAC
CTAAACGGAA GTGGCTTCCT CGCCACGTTC ATTACGGGAG TTATTGTGGG CAACAGCCGC
TTTGCCTATC AGCGCAATAC CTTTGTGTTT CTCGACGGGC TGGCCTGGCT AGGCCAAATT
GCTATGTTTG TTATCTTAGG TCTTCTGGTT ACCCCAACAG AGCTGTTTGT TAGTTGGAAA
GAAGGTTTAT TGATTGCCTG TGTGCTGATA TTTATAGCGC GCCCGCTGGT GGTAATGCCC
ATTTTGTTGC TTTCTAAGTT CTCGTTTAAA GCGTCTCTGC TTATTTCGTG GGTGGGGTTA
CGCGGCTCAG TGCCCATTAT TTTGGCTATA TTCCCGCTTA TATTCGGCAT GCCTTACGCC
GAGCTTATAT TCAACGTGGT ATTTTTCATC GTGCTAATTT CGGCCTTGTT GCAAGGTTCT
ACGCTCCCTT ATGCGGCGCG CAAGTTAGGC TTAGTGCTAG ATGATAACGT TAAAGCGTCG
AGTACCCTAG AAATTGTCAA AGTCGCCAAG AGCAAGCGGG AACTTATCGA AATTGAAGTA
TCAAAGCTTT CGCCAGCGCT TGATAAAACT ATTAGTGAGT TAGCGTTACC CGATAATACG
GTTGTGGCGA TGATTGCCCG TGGAGAAGAC ACCCTTATCC CTAAAGGAAG CACGAAAATA
GAGAGAGGCG ATCAAATTTT TATCATCACA AAACTGCTCG ATAAAAACGC CGTTGAGCAG
TGCTTTTACA GCGAGTAG
 
Protein sequence
MFAVDHIILL SAVLAILGVL ASKLSPRFGV PVLVLFLGVG MLAGEDGIGR IFFDNADAAH 
AIGTFALILI LFDGGLQTSK RSIVQAWKPA ALLATFGVIG TATLTGLSAM IILDLPLYKG
LLLGAIVGST DAAAVFSVLR NAGIRIPTKI KSTLELESAS NDPMAIFLTI GLITLIQDST
TNPLDLASLF ASQMGVGAFV GIAIGGIAVW LFRRVTLMAI GLYPVFVMLF GVLSFGLAAN
LNGSGFLATF ITGVIVGNSR FAYQRNTFVF LDGLAWLGQI AMFVILGLLV TPTELFVSWK
EGLLIACVLI FIARPLVVMP ILLLSKFSFK ASLLISWVGL RGSVPIILAI FPLIFGMPYA
ELIFNVVFFI VLISALLQGS TLPYAARKLG LVLDDNVKAS STLEIVKVAK SKRELIEIEV
SKLSPALDKT ISELALPDNT VVAMIARGED TLIPKGSTKI ERGDQIFIIT KLLDKNAVEQ
CFYSE