| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03166 |
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| Symbol | |
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| ID | 6778128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3424294 |
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| End bp | 3427173 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642756616 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002127454 |
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| Protein GI | 196157965 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACACA AGCCAACAAG GTTACGCTCT TTACTACTTT CAAGCATGAT ACCTCGACTA
GCATTGTTAA TAGCAGTGCT GTCTATAATG CTATTTGGGC TTTCTTTTCA CTTTATCATT
AAGCAAACAG ATGAACTTCA GCGTCAGTCG ATAAGTGGAT TAGAGCAGGA CATTAACTAC
ATTGTTAGTG ATACCACTCG ACAACTTGCT GACCTTGCTG CAAACGACAT CATTATCAAC
GCGCTTGTCG ATATAGAGCG CCGTGATAGT TATCTGCCAA TGTTCTTTCG CTCGTTAAAT
TTAACGCAGG CGAAAAGCGT AGAGTTTGCA CTATTTGATT TTGCGGGAAA CCGAGTCATC
GATAAAAACT GGAATGCAAC TATTCCTGAA TCGTTAAGCA GTGCATGGCG ACAACAGACG
TTAGGCTCAT CGAATACGTT CTCTTCTGTA TCACAGTATG GTGTACTTAT TAGTGTTCCA
GTGCTACTCA AAGGGGTTGC CGAAGGTGCA CTGGTCATGT ACGTTGATAG CTTACAATCA
TTATTAGCGC CTTACCCTCG TTTAACAAAT CAGCTTGTCA CAGATTCAAC TGGCCATGTG
CTGTTTAGCA GCGAACCAGC CCTCATTGCA CCCGGCTCAA ATTTTTCTAA TTTCAACAAT
AGCGGGTACG CTATAACGCA GGCAAACTGG AAAAATCTAA CGCTATACAG CGTTAAGCCC
ACAATAACAG CGTACCGGGA AATGGCGTGG ACTGGCATTG TTTTGTTAGC CATGATTGCA
GGCTTCATAT TTATTATTCT GCACATGGTT AGCATGACAG GTACATTAGC AGAACGGACG
CTCTCTAAGC TTTACGAAGA TATCAAAAAC AGCCTTAACA GCAATAGCAA TGCACCTTTG
CGCGATGACC AACAGCTTGA AGCGCAAGAG CTATCCGACA TTCGTAAAGC GTTTGACAAG
CTAATTTGGG ACCTCACCGA AGTCTCTCTT TCAAATGAAC AATTTTCTAA CGTTCTTGAG
TCAATGGGCG ACATGTTAGT TGTTGTCGAT CAAAATCAAG AAGTCTTGCT TTCGAACAAA
CGGTTTGATG ATTTTTGCGA TGACCAATAT GGCGAAAAGC AAGGTATCCT TAAATTTATC
ATGCAAAAGT TGGGGGCGAC TCAAAGCAAT GAACTAAAAC ACTTTTCGGT TAGCACAGGA
CAAGAGCGGT TTGTTCGTTG GACAAAAACC TCTCTTGCTG ATGCGAATGG CAACATTCGC
GGCGATATTT TTGTAGGTAG TGATGAAACC GAGCAGCGTT CGTTAGAAAG CCACGTAAAA
GTGCTTACCC ACGCGATGGA TGAAGCCACC GTATCCATTA TCATTTCTGA TATCAAACGC
GTTGGTCAGC CTATTATCTA TGCAAATAGT GCATTTGAAG AGCTAACTGG CTATACCCGC
GAAGAAATCA TCGGGCATAA TTGCCGTTCT ATGCAGGGAG AGGAAACCAA AGAAAAGACC
ATTGACTGCA TTCGCAAAGC TATCGCTACC CGAGAGCCCA TAGAAACCAC GTTATTGAAC
TATAAAAAAG ACGGCACCAA GTTCTTTAAT CGCCTAAACC TGACTCCCGT TAAAACTAAC
GGTGAAATAA CTCACTACAT CGGGTTTCAG CAAGATGTAA CCCAGCAGCG TCAAACCGAA
CAATACCTTC AGGAAGCAAG AGAGAAAGCG GAAGAGTCTG CGCGCCTCAA GTCTAGCTTT
TTGGCAAGTA TGAGCCATGA AATCCGTACA CCTATCCACG GCATTTCTGG CGTACTACAA
CTGTTAGGGG GCTCAGAACT TACCGGGGAA CAAAAACATT ACTTGTCTTT GGCTAAATTT
AGTATTCAGG GATTGTTGCA CATCGTAAAC GATATTTTGG ACTTCTCTAA AATTGAAGCC
GGTCAGCTTC AAATAGAAGA GAGCCCGTTT GATATCTTGG AGTCTCTGGA AAATTTACAA
AGCCAGTACG CCATACTCTG CCAAGAAAAA GGGCTAGAAC TACACTTCCA CTTTGACTTA
CAAGGCTACC ATGTCGTTCA AGGTGATGAT GTTCGATTTA GACAAATTCT TTCAAACTTA
TTAGGTAACG CCGTCAAATT CACCGATACA GGCTACATTG AAGTAACTAC CTGTATCGAG
AAAAACCCCG ACAATACCCT TCGTTTATTA TGCAGCGTAA AAGATACAGG TATCGGAATA
GCGCAAGATA AGCAGAGCAC TATCTTCGAT GTATTTACGC AAGAAGACCT TTCTACTACT
CGCAAGTTTG GTGGAACCGG CCTTGGCCTT TCTATAAGTA AACAGCTGTG CGGGCTTATG
GGCGGCGACA TCAAACTTGA AAGTGTTAAA GGTAACGGCA GCACTTTCTC GTTCACTATT
CAATTAGAAG AGGCCGATGA AAGCCTGATA AAACCGATAC ATTACAACAA CGCGTCGAAA
ACCGTGAAAG GCAAGAAGCG TAAAGTGCTC ATTGTAGAAG ACAATGATAT TAACCAGGTA
ATTGCAAAGC AGCACCTTAG CAATCACACC ACGTTAAGTG CAAAGTCGGG TGTTGAGGCC
CTGCAAGCTT TGAACAAAAT GAAGGTTACC TTCGACGTTA TCTTGATGGA TTGCCAAATG
CCCGAAATGG ATGGGTTTGA AGCCACCAAG CGCATTAGAA ATGGCGAAGC CGGCTCTCGA
TATTTGAATG TCCCCATCAT AGCCCTTACG GCTAATGCCA TGAAAGGTGA TAAAGAGCGC
TGCGTAAGCG CTGGGATGGA CGATTATTTA AGTAAGCCTT TTGACGCCGA AGACCTTACC
GACAAAGTGG AACTTTGGGC AAGTATTGAG AAAGACCAAG AAGCGAACGC CGTACATTAG
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| Protein sequence | MQHKPTRLRS LLLSSMIPRL ALLIAVLSIM LFGLSFHFII KQTDELQRQS ISGLEQDINY
IVSDTTRQLA DLAANDIIIN ALVDIERRDS YLPMFFRSLN LTQAKSVEFA LFDFAGNRVI
DKNWNATIPE SLSSAWRQQT LGSSNTFSSV SQYGVLISVP VLLKGVAEGA LVMYVDSLQS
LLAPYPRLTN QLVTDSTGHV LFSSEPALIA PGSNFSNFNN SGYAITQANW KNLTLYSVKP
TITAYREMAW TGIVLLAMIA GFIFIILHMV SMTGTLAERT LSKLYEDIKN SLNSNSNAPL
RDDQQLEAQE LSDIRKAFDK LIWDLTEVSL SNEQFSNVLE SMGDMLVVVD QNQEVLLSNK
RFDDFCDDQY GEKQGILKFI MQKLGATQSN ELKHFSVSTG QERFVRWTKT SLADANGNIR
GDIFVGSDET EQRSLESHVK VLTHAMDEAT VSIIISDIKR VGQPIIYANS AFEELTGYTR
EEIIGHNCRS MQGEETKEKT IDCIRKAIAT REPIETTLLN YKKDGTKFFN RLNLTPVKTN
GEITHYIGFQ QDVTQQRQTE QYLQEAREKA EESARLKSSF LASMSHEIRT PIHGISGVLQ
LLGGSELTGE QKHYLSLAKF SIQGLLHIVN DILDFSKIEA GQLQIEESPF DILESLENLQ
SQYAILCQEK GLELHFHFDL QGYHVVQGDD VRFRQILSNL LGNAVKFTDT GYIEVTTCIE
KNPDNTLRLL CSVKDTGIGI AQDKQSTIFD VFTQEDLSTT RKFGGTGLGL SISKQLCGLM
GGDIKLESVK GNGSTFSFTI QLEEADESLI KPIHYNNASK TVKGKKRKVL IVEDNDINQV
IAKQHLSNHT TLSAKSGVEA LQALNKMKVT FDVILMDCQM PEMDGFEATK RIRNGEAGSR
YLNVPIIALT ANAMKGDKER CVSAGMDDYL SKPFDAEDLT DKVELWASIE KDQEANAVH
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