| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03160 |
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| Symbol | |
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| ID | 6778167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3417996 |
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| End bp | 3419987 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642756610 |
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| Product | transketolase 1 (TK 1) |
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| Protein accession | YP_002127448 |
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| Protein GI | 196157959 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCTC GTCGTGAACT CGCCAATGCT ATCCGTGCAC TAAGCATGGA TGCTGTTCAA
CAAGCTAAAT CAGGTCACCC AGGCGCCCCA ATGGGGATGG CTGACATCGC GCAGGTACTA
TGGGGTGATT TCTTATCACA CAATCCTGCT AACCCGTCTT GGGCTAACCG CGATCGCTTT
GTGCTTTCAA ATGGTCACGG CTCGATGCTG TTGTATTCTT TGCTTCACCT TTCAGGCTAC
GAACTGCCTA TTGAAGAGTT AAAGAACTTC CGTCAGCTTC ACTCTAAAAC CCCAGGCCAC
CCAGAGTATG GCTATGCGCC AGGTGTTGAA ACTACTACTG GCCCGCTAGG TCAGGGTATT
AGCAATGCAG TGGGTATGGC GCTTGCTGAA AAAGTGCTAG CAGCACAATT CAACAAAGAC
GGTCACACTA TTGTTGATCA TCACACCTAT GCATTCTTAG GCGACGGCTG CTTGATGGAA
GGTATCTCAC ACGAGACGTG TTCACTAGCC GGTACGCTTG GTCTTGGTAA GCTCATCGCA
TTTTGGGACG ACAACGGCAT TTCAATTGAC GGTGAAGTAG AAGGTTGGTT CACCGACGAC
ACACCAGCGC GCTTCAAGAG TTACGGCTGG GAAGTGATTG AAGGTGTTGA CGGTCACGAT
GCTGAGCAAG TGAAAGCCGC AATCGAAAAA GCGCAAGCGA ATACAACGCA ACCAACGCTA
ATTTGCTGTA AAACCACCAT TGGATTTGGT TCGCCTAATA AAGAAGGTAC TGAGTCTTGC
CACGGTGCAC CGCTTGGCGA TGATGAAATT GTTGCTACGC GTGAGAAGCT TGGTTGGAGC
CACGGCGCAT TTGAAATTCC AGACGATATC TACGCGGGCT GGGATGGTAA AGACAAAGGC
TCAAAAACGG AAAGCGCGTG GAATGACGCT TTCGCAGCAT ACGAAGCCGC CTACCCAGAG
CTTGCAGCAG AATTCAAACG CCGTGTAAAT GGCGAGTTGC CAGCAGATTT CAGCGACAAA
GCAGACGCTA TCATCGCTGA ACTTCAAGCT AACCCACAAA ATATCGCGTC ACGTAAAGCG
TCGCAAAATG CATTAAACGC GTTTGGTCCG TTACTTCCTG AGCTTTTAGG CGGCTCTGCC
GACCTTGCTG GTTCTAACCT GACTATTTGG GAAGGTAGCA AAGGCGTTGA AGCAAACGAT
GCATCAGGTA ACTACATTTA TTACGGTGTA CGTGAGTTTG GTATGTCGGC CATGATGAAT
GGTATTGCCC TTCACGGTGG CTTTAAGGCA TACGGTGCAA CCTTCCTAAT GTTTATGGAA
TATGCACGCA ACGCGGTACG TATGGCAGCG CTAATGAAGC AGCCTGCAAT TTTCGTTTAC
ACCCACGATT CAATTGGTCT AGGTGAAGAC GGCCCAACTC ACCAGCCGGT GGAGCAGGTG
GTTGCGCTAC GTGCAACGCC TAACCTTGAT AACTGGCGCC CTTGTGATCA GGTTGAGTCT
GCTGTGTCGT GGAAGTCTGC CATTGAGCGC ACTGACGGCC CAACAACACT AATCTTCACA
CGTCAAGGCT TAGCGCAGCA AGAAAGAACG GCTCAACAAG TGGCTGATAT CGCGAAAGGC
GGTTACGTAC TTAAAGACTG TGAAGGTACG CCTGAGCTTA TTCTTATTGG TACCGGTTCT
GAAGTGCAGC TAGCTGTTGA AGCGGCAGAA AAACTTACCG AGCAAGGTAA AGCGGTTCGC
GTAGTATCTA TGCCATCTAC TGATGTTTTT GATCGTCAGT CTGCTGACTA CCGAGAAAGC
GTACTGCCGT CTAGTGTTGT TAAACGCGTA GCGGTTGAGG CCTTGTCAAA ATACAGCTGG
TACAAGTACG TTGGCTTTAA CGGCGCTATC GTAGGTATGG ATACCTTTGG TGAGTCTGCA
CCTGCAGGCG ACCTATTTAA GCACTTCAAC ATTACCACTG ACGCTGTAGT AGAGGCTGCA
CTGTCTCTGT AA
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| Protein sequence | MPSRRELANA IRALSMDAVQ QAKSGHPGAP MGMADIAQVL WGDFLSHNPA NPSWANRDRF
VLSNGHGSML LYSLLHLSGY ELPIEELKNF RQLHSKTPGH PEYGYAPGVE TTTGPLGQGI
SNAVGMALAE KVLAAQFNKD GHTIVDHHTY AFLGDGCLME GISHETCSLA GTLGLGKLIA
FWDDNGISID GEVEGWFTDD TPARFKSYGW EVIEGVDGHD AEQVKAAIEK AQANTTQPTL
ICCKTTIGFG SPNKEGTESC HGAPLGDDEI VATREKLGWS HGAFEIPDDI YAGWDGKDKG
SKTESAWNDA FAAYEAAYPE LAAEFKRRVN GELPADFSDK ADAIIAELQA NPQNIASRKA
SQNALNAFGP LLPELLGGSA DLAGSNLTIW EGSKGVEAND ASGNYIYYGV REFGMSAMMN
GIALHGGFKA YGATFLMFME YARNAVRMAA LMKQPAIFVY THDSIGLGED GPTHQPVEQV
VALRATPNLD NWRPCDQVES AVSWKSAIER TDGPTTLIFT RQGLAQQERT AQQVADIAKG
GYVLKDCEGT PELILIGTGS EVQLAVEAAE KLTEQGKAVR VVSMPSTDVF DRQSADYRES
VLPSSVVKRV AVEALSKYSW YKYVGFNGAI VGMDTFGESA PAGDLFKHFN ITTDAVVEAA
LSL
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