Gene MADE_03159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03159 
Symbol 
ID6778103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3416967 
End bp3417977 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content46% 
IMG OID642756609 
ProductD-erythrose 4-phosphate dehydrogenase 
Protein accessionYP_002127447 
Protein GI196157958 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAATA TTGCCATAAA TGGGTTTGGT CGTATTGGTC GTAACGTATT GCGCGCGCTT 
TATGAAAGTG GGCGCAATAA CGAATTCAAC GTGGTGGCCA TTAACGACAT TGCTAAACCC 
GAAGGCATTG CACATTTACT TAAATACGAC ACCGCCCACG GGCGGTTCCG TTTTGATGTG 
GCCTTAGAAA ACAATACGCT AAATGTAGCG GGTGATGATA TTGCTTTGCT TGCAATAAGT 
GATATTAAAG AGCTTCCGTG GAGAGACTTA GGCGTTGATA TTGTGCTTGA GTGTACGGGA 
AAGTTTGATG ACAGAGCGTC GGGGCAAGCG CATTTAGATG CAGGCGCTGG CAAAGTACTT 
TTCTCTTCAC CCGGTTCACC AGATTTAGAC AATACGGTCA TTTTTGGGAC CAACGAAGAC 
ACGTTGACCA GTGAACAAAA ATTAGTCTCT AACGGTTCGT GCACCACAAA CTGCATTGTT 
CCTGTCATTC AAGCGCTAGA TGCGGCATTC GGTGTTGAAA GTGGTACGAT AACAACCATT 
CACGCGTCTA TGCACGACCA GCAGGTTATC GATGCTTATC ACGAAGATTT GCGCAGAACC 
CGTGCGGCCA GTCAGTCAAT TATACCTGTT GATACACGTC TTGCTGCGGG TATAGAGCGC 
ATTCTGCCTA AGTTTGCGGG TAAGTTTGAA GCCATTGCCG TTCGCGTGCC TACTATCAAT 
GTTACTGCCA TGGACTTAAG CGTTACCCTT CAATCTAAGG TAACCATTGA GCAAGTTAAC 
CAAGCCCTTC GCAGTGCAAA AGCAGGGCGA TTACAAGGCA TACTCGATTA CACCGAAGAG 
CCTTTGGTGT CGGTAGATTT CAATCACGAC CCCCACTCGT GTATTGTAGA TGGTACACAG 
ACAAGAGTCA GTCATAAGCA ACTAGTAAAA ACGCTGGTGT GGTGTGACAA CGAATGGGGT 
TTTGCAAACC GTATGCTCGA CACAGCAAAA GTGATGTTCG ACGCAAAATA A
 
Protein sequence
MVNIAINGFG RIGRNVLRAL YESGRNNEFN VVAINDIAKP EGIAHLLKYD TAHGRFRFDV 
ALENNTLNVA GDDIALLAIS DIKELPWRDL GVDIVLECTG KFDDRASGQA HLDAGAGKVL 
FSSPGSPDLD NTVIFGTNED TLTSEQKLVS NGSCTTNCIV PVIQALDAAF GVESGTITTI 
HASMHDQQVI DAYHEDLRRT RAASQSIIPV DTRLAAGIER ILPKFAGKFE AIAVRVPTIN 
VTAMDLSVTL QSKVTIEQVN QALRSAKAGR LQGILDYTEE PLVSVDFNHD PHSCIVDGTQ 
TRVSHKQLVK TLVWCDNEWG FANRMLDTAK VMFDAK