Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03155 |
Symbol | |
ID | 6778146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3411607 |
End bp | 3413664 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756605 |
Product | Acylaminoacyl-peptidase |
Protein accession | YP_002127443 |
Protein GI | 196157954 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGGCTG TGCTATTTAG CGTAGGCACG CTAGCTATGC CAGCCACAGT GCTTGCGAGC AATGAAACAG AATCTTTTAC TACCGACTCT GAACGCTATT TTAAATCAGA AGATATCTTC AACCTTGAAT ACGTCAGTGA AGTCCAGGTA TCTCCAAACG GTAAAAATAT CGCGTACGTG CGCCGTTCAA ACGACATCAT GTCAGACAGT AGCCGCGCCA ATGTTTGGCT AGCCTCGGTA GATGGTAAAT CACACCGTCC CTTACTTTCT TCGAAAAAAA ATTATTACTC TATTCGCTGG TCACCAGATG GCAGCCGATT AGCTTACCTT TCCAATGAAG AGGGTAAACC GCAACTGTAT GTGCGCTGGA TGGATACGGG GCAAACGGCG TTAGTCACCA ACGTTACTTC AAGCCCAAGT AATATCACGT GGTCACCCGA CGGAAAATAC ATTGCATTCA CTATGAGTGT GGATGCCAAG GAAAAGCCGC TAGACGTTAA AATGCCTAAA AAGCCGGAAG GCGCAAAGTG GTCGCCTAAA TTCCAATATA TCACTAAGGC GCGTTATCAA GCCGATGGCA AAGGCGTGCT TGACCCTGCC TATACCCATA TCTTTATTGT GCCCTCTGAC GGAGGTACAG CAAGACAGTT AACCTCGGGC AACTACCATC ACAACGGTCG GTTAAGTTTT GCGCCGAACG GTGAGAAGAT TTATTTCTCT GCTAACCGAA GTGATAACTG GGAATATGAA CCCGTTGAGG CCGATATATT TTCTGTTGAT ATGACGGGGA ATATTGAACA ATTGACGCAG GACAAAGGGC GAGAGTCGTC ACCAGTAGTA TCGCCTGACG GAAAGTATAT TGCTTATGCG TACCGCGACG ACGAAAAAGT GATGTACAAA AATAGCTATT TGTATGTAAT GAATAGCGAC GGCTCTGAAC AAAGAAACAT AACAAAAGAT ATTGATAATT CGGTGTCTAA TTTTCACTGG AAAGACAATA AACGCATCTA TTTTCAGCAA TCAGTTCGCG GTCTGGCCCA GGTGGATGTG GTTTCGCTAT CGGGTAGTGT AAAAGCCGTA GCAAAAGGGC TTGGTGGCAC CACGTTAGGC CGACCTTATG TATTTGGTAC TTACCATGCG GTTGGCGATG TTGTGGCCTA CACCAAAGGT CGTACCGACC GGCCTGCAGA TTTGTTCGTT ACCACCAGAA AAGAGCGCCA GCTTACAGCA CTTAATGAAG ATGTTTTAGG CCACAAGCAG CTCGGTGAAG TGAAAGAAGT TGTTTACCCA TCGTCTATCG ACGGTGAGGA AATTCAGGGC TGGTACATTC TGCCGCCAAA CTATGACAGC TCAAAAACCT ACCCTCTCAT TCTGGAAATC CACGGTGGGC CTAACCTAGC CTATGGGCCT GTATTTACTG CTGAATTGCA GCGCATGGCC GCAGAAGGTT ACGTGGTGTT TTATGATAAT CACCGAGGAA GTACGGGATA CGGCGAACGC TTTGCGTTAT TACTTCAAGG CAAATATAGC TCTGAGTACG ACTTTGCTGA CCATATGTCT GGGGTAGACG CGCTGATTGA AAAAGGCATT GCCGACCCTG AACGTCTATT CATTACGGGG GGCTCTGCAG GTGGTATTGC ATCTGCTTAT GCCATTGGTC TTACTAACCG TTTCAAAGCG GCAGTGGTTG CAAAGCCCGT TATTAACTGG CTGTCGAAAG TGCTTAGCGC CGATTCGGGC CTTTATCAAA TTCCTTTTCA GTTCCCGGGA AAACCGTGGG ACAACGTTGA GCACTACTGG AAGCGCTCGC CGTTATCGCT AGTGGGCAAC GTTACTACGC CTACTATGCT AATTACCGGT GTAGAAGATA AGCGCACGCC AATGTCTGAA ACCGAGCAAT TTTATCAGGC ACTTAAGCTA CAAAAGGTTG ACAGTGTATT AGTTAAAGTT CCCGGTTCGC CTCACGGTAT TGCCGCTAAA CCTTCACGAA TGATTGGCAA AATAGAAAAT ATTCTGGCGT GGTTCAAGAA GTATGACAGC GACGCTGTCA AAAAGTAG
|
Protein sequence | MWAVLFSVGT LAMPATVLAS NETESFTTDS ERYFKSEDIF NLEYVSEVQV SPNGKNIAYV RRSNDIMSDS SRANVWLASV DGKSHRPLLS SKKNYYSIRW SPDGSRLAYL SNEEGKPQLY VRWMDTGQTA LVTNVTSSPS NITWSPDGKY IAFTMSVDAK EKPLDVKMPK KPEGAKWSPK FQYITKARYQ ADGKGVLDPA YTHIFIVPSD GGTARQLTSG NYHHNGRLSF APNGEKIYFS ANRSDNWEYE PVEADIFSVD MTGNIEQLTQ DKGRESSPVV SPDGKYIAYA YRDDEKVMYK NSYLYVMNSD GSEQRNITKD IDNSVSNFHW KDNKRIYFQQ SVRGLAQVDV VSLSGSVKAV AKGLGGTTLG RPYVFGTYHA VGDVVAYTKG RTDRPADLFV TTRKERQLTA LNEDVLGHKQ LGEVKEVVYP SSIDGEEIQG WYILPPNYDS SKTYPLILEI HGGPNLAYGP VFTAELQRMA AEGYVVFYDN HRGSTGYGER FALLLQGKYS SEYDFADHMS GVDALIEKGI ADPERLFITG GSAGGIASAY AIGLTNRFKA AVVAKPVINW LSKVLSADSG LYQIPFQFPG KPWDNVEHYW KRSPLSLVGN VTTPTMLITG VEDKRTPMSE TEQFYQALKL QKVDSVLVKV PGSPHGIAAK PSRMIGKIEN ILAWFKKYDS DAVKK
|
| |