| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03153 |
|---|
| Symbol | |
|---|
| ID | 6778143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3407870 |
|---|
| End bp | 3409942 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642756603 |
|---|
| Product | polyphosphate kinase |
|---|
| Protein accession | YP_002127441 |
|---|
| Protein GI | 196157952 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0855] Polyphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.312192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACG ACGTTTTATA TTATCCCAAA GAATTGAGCT GGCTATCGTT TAACGAACGC
GTATTGCAAG AAGCTGCGGA TAAGAATAAC CCTGCGATAG AACGCATTCG CTTTCTGGGT
ATTTACTCTA ATAACCTTGA TGAATTTTAT CGGGTACGCG CGGCAGATGT TAAACGCCTT
ATCACGATTG CGCAAAACGA CGGGAACGAA GAAGAAGCAG AGCGCCTCAC CGAACTTATG
GCGCAGATAC AAAAGAAAGT GGTACAGCTT TCTGAAAAAT TTGACCAAAT CCATAAAGAC
GTTGTCAAAA GCCTTGCCCG CTACAATATT CATATCCTGC GTAAAGACGA CTTAGATGAT
TATCAAAAGC AGTGGGTGCG TAACTTTTTT ATCAATAAAG CACTGCGACA CATCGCTCCC
ATATTAATTG ATAAAAAGAC AGACCTGCTC AGCCGCTTAA ACGGCAACTC TGTGTATTTA
TATGTCGCAC TACGAAGAAA AGAGCGCAAC CCTAAATTCG CCGTTATTCA AGTTCCCACT
TCTGAGATGT CGCGCTTTAT GCTGATCCCT CCGCAAAAGA GCCGTAAGAA AAAGAGCATT
GTTATGCTCG ATGACATGAT TCAGCTGTGC ATTGAAGATA TTTTCCGCGG GTTCGTTAAA
TTCGACGAAA TTGAAGCTTT CTCCTTTAAA ATGACACGAG ATGCGGAATA CTCTATCAAC
GAAGAAATTG ACGAAAGTTT CGTAGAAAAA ATGTCAGAAA GCATGAAGCA GCGTCTTATT
GCCGAGCCTG TTCGCGTTAT TTATGACACC GACATGCCTG AAGACATGCA GTCGGACCTA
CGCAAGCGCC TTAAAATAAC CAAGCTTGAT ACCATGCATG CTGCAGGGCA CTATCGCAAC
TTTAAAGATT TCATCGGCTT CCCCAATGTG GGCCGAGATT ATTTAGAACA TGCACCGCTT
CCTGCTATCG ACAGCAAGGC ATTTTCGAAA TACAACACCG TATTCGATGC CATAACTGCT
CGTGATATCT TGCTATATTA CCCTTATCAT CGCTTCCTTC ACTTCACAGA GTTCGTGCGT
CAGGCCGCTT TCGACCCGAA CGTGAAAACC ATACGCATTA ATATCTATCG GGTGGCGAGT
AATTCTCGCA TAATAAATTC GTTGATTGAC GCGGTAGATA ACGGCAAAAA AGTCACCGTA
GTCGTAGAGC TTCGCGCGCG TTTTGATGAA GAAGCAAACA TCGAATGGTC TAAGCGCATG
ACCGATGCAG GCATACGCGT AGTACTTGGT GTGCCAACCC TGAAAATCCA CTCTAAATTA
TGTATTGTGA CCCGGGAAGA ACGGGGCAGT TTGGTGAATT ATGCGCATTT CGGTACGGGT
AACTTCAACG AGAAAACCGC GAAAATTTAT ACCGATTACA GCTTATTCAC CCGCAATCAG
GAGCTTGCCA ATGAAGGCGT CGCAGTATTC GATCTTATTC AATACCCTTA CCGACGTTAT
AAGTTTCAGC ATTTACAAAT TTCGCCGTTA AACGCCAGAA CCAAAATTCA GTCGTTAATT
CGCCAAGAGA TTCAGCACCT GAACCAGGGC CAAGATGCGC AAATCACCTT TAAGATTAAC
AACCTTGTTG ATAAAGAACT TATTGATGAT TTATATCGCG CGAGCCAGGC TGGCGTTAAG
ATCCGCGGTA TCGTGCGCGG CATGTGCTCA CTTAATCCAG GCATAAAAGG GATTAGCGAA
AACATCGAGA TCATCTCTAT TGTTGATAGG TTCCTTGAAC ACCCTCGCGT GATGATTTTT
GAAGGCGGTG GCGAAAGAAA AGTGTATATT TCATCTGCTG ACTGGATGAC CCGAAACATG
GATAACCGCA TAGAAGTAGG CTGCCCCGTT TACGATAAAG GTCTTCAACA GCGTATTGTC
GATATAATGG AACTGCAATT TAAAGATACC CTGAAGGCTC GAGTGATTGA CAAGGATCAG
AGCAACAAGT ACGTTGCGAG GGGTAATCGT AAAAAACTTC GCTCGCAAAT AGAAATTTAC
GACTATTTAA AGAAGCTAGA AGACACTTTG TAG
|
|---|
| Protein sequence | MDNDVLYYPK ELSWLSFNER VLQEAADKNN PAIERIRFLG IYSNNLDEFY RVRAADVKRL
ITIAQNDGNE EEAERLTELM AQIQKKVVQL SEKFDQIHKD VVKSLARYNI HILRKDDLDD
YQKQWVRNFF INKALRHIAP ILIDKKTDLL SRLNGNSVYL YVALRRKERN PKFAVIQVPT
SEMSRFMLIP PQKSRKKKSI VMLDDMIQLC IEDIFRGFVK FDEIEAFSFK MTRDAEYSIN
EEIDESFVEK MSESMKQRLI AEPVRVIYDT DMPEDMQSDL RKRLKITKLD TMHAAGHYRN
FKDFIGFPNV GRDYLEHAPL PAIDSKAFSK YNTVFDAITA RDILLYYPYH RFLHFTEFVR
QAAFDPNVKT IRINIYRVAS NSRIINSLID AVDNGKKVTV VVELRARFDE EANIEWSKRM
TDAGIRVVLG VPTLKIHSKL CIVTREERGS LVNYAHFGTG NFNEKTAKIY TDYSLFTRNQ
ELANEGVAVF DLIQYPYRRY KFQHLQISPL NARTKIQSLI RQEIQHLNQG QDAQITFKIN
NLVDKELIDD LYRASQAGVK IRGIVRGMCS LNPGIKGISE NIEIISIVDR FLEHPRVMIF
EGGGERKVYI SSADWMTRNM DNRIEVGCPV YDKGLQQRIV DIMELQFKDT LKARVIDKDQ
SNKYVARGNR KKLRSQIEIY DYLKKLEDTL
|
|---|
| |