Gene MADE_03140 details

Gene Information

• Locus tag: MADE_03140
• ID: 6778078
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: -
• Start bp: 3392999
• End bp: 3394930
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642756590
• Product: putative cold-active aminopeptidase; secreted using a signal peptide
• Protein accession: YP_002127428
• Protein GI: 196157939
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0308] Aminopeptidase N
• TIGRFAM ID: [TIGR02411] leukotriene A-4 hydrolase/aminopeptidase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.409297
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAT ACGGAGTACT GGCTACATTC GTATGCGCGC CTGTGTTGTT CGCGTGCAGT 
GATAACAGCA GTGTAGACAC AGCGAAAACA GATAAAGAGC AGGCCGTCAA TGAAAGCGCG 
GTCTTGAATG TCGAAGCAGA AAAACGCGAC GATGCTACCA TTGCGTCTGG CGTAGACTAT 
CATTCGTTTG CGAACCCTAA TGAAGTTCGG GTTACGCACT TAAGCCTAGA CCTCACCGCA 
AATTTCGAGA CCAAACAGCT CGTTGGCGAT GTAACACTTG ATGTAAAGCG CGCAAAGCCT 
GAAAACAATA CGTTGGTATT GGATACACGC GCTCTAGACA TCGACAGTGT CACTGTTAAT 
GGTGAAAGCG TTCCCTTTGA AATAGGCAAG ACCGATCCTG ATTTAGGTAC GCCTCTTACC 
ATTACGTTAC CTAGCGCTGC GAATTCAGTA ACCGTAGCCT ATTCCACATC ACCTGACGCC 
TCTGGCGTGC AGTGGTTAAC GCCAGCACAA ACGGCAGGTA AACAGCATCC GTTTCTATTT 
ACACAAGCCC AAGCGGTTCA CGCACGAAGC TTTATTCCCC TTCAAGATTC ACCACAGGTG 
CGCGTGACCT ATGACGCGAT CATAAAAACA CCTGAAGCTC TGTTGGCGGT AATGAGCGCG 
TCGAACGACC CTACAACAAA GCGCGACGGC GAATATGAGT TCACCATGCC ACAGCCTATT 
CCGTCGTATC TTATTGCGTT GGCAATCGGT GATCTGAAGT TTAAAGCCAT GGGTGAACGT 
ACTGGTGTGT ATGCAGAGCC AGCACTTCTT GAAAGCGCAG CGAAAGAGTT TGAAGACACT 
GAAGCGATGC TTGAAGTAAC AGAAGAAACC TATGGTCCCT ACCAGTGGGA TCGTTATGAC 
CTGCTTATTC TACCGCCGTC GTTCCCGTTT GGTGGCATGG AAAACCCTCG CTTGTCGTTT 
ATCACACCAA CGGTTATTGC CGGTGATAAG AGCTTGGTTT CATTGATTGC CCACGAACTT 
GCACACAGCT GGTCGGGCAA CACCGTAACT AACGCAACGT GGCGCGATCT GTGGTTAAAC 
GAGGGGTTCA CCACTTATTT AACTTACAGA ATTATGGAAA TGATCTATGG TCATGATCGT 
TTTAAAAAAG AAGCAGTGCT AGGTTATCAA GACTTAGAGA ACGATATTGC AGCGTTAGAT 
GAAAACGACG AGATCTTAGC TATCGACCTT CGTGGCCGCA ACCCAGACGA TGTTTTCTCG 
AATATTCCCT ATGAAAAAGG CGCACTATTT TTACGTGAAA TTGAGCAAAA AATAGGTCGC 
GAAAACTTTG ACGCGTTTTT AATGCAGTAC TTTAAAGACT TTGCTTTTAA GAGCATAACC 
ACCGACACAT TTATCGCTTA TTTAGATGAA ACTCTATTGA AGCAATACCC AGATAAACTC 
GATGCTAAGC GCATAAATAC TTGGATTTTC GAACCGGGTC TTCCGGAAGA TGCACCTCAG 
CCAGAATCTG ATGCTTTCAC CAAAATCGAT GATACACGCA CGGCATGGCT TTCAGGTGAT 
GTAAACGCGG CGGATATAGA AACGGCACAA TGGACGGTAC ACGAGTGGTT ATACTTCCTG 
AACAATATGC CTGAAACATT GACTGAGCCA CAGCTTGCTG AATTGGACAA GGCATTTTCG 
TTAACGTCAA CAAAGAACAA CGAAATTGCT CATAGCTGGC TGATGATCGC GGTAGAAAAT 
AACTACCAAC CTGCTTTTGA TCGTTTGTAC ACCTATCTAG TGTCGATAGG ACGCAATAAA 
CTGGTTAAGC CGCTGTATCG TGAGCTATCA AAAACGCCCG ACGGCAAGGC GTTTGCGAAG 
CGCGCCTTTG AAGAAGCGAA ACCGGGCTAT CACCCGCTCA CCGTTAGAGC CAATGAGGGA 
TACGTAAACT AA 

 

Protein sequence

MKKYGVLATF VCAPVLFACS DNSSVDTAKT DKEQAVNESA VLNVEAEKRD DATIASGVDY 
HSFANPNEVR VTHLSLDLTA NFETKQLVGD VTLDVKRAKP ENNTLVLDTR ALDIDSVTVN 
GESVPFEIGK TDPDLGTPLT ITLPSAANSV TVAYSTSPDA SGVQWLTPAQ TAGKQHPFLF 
TQAQAVHARS FIPLQDSPQV RVTYDAIIKT PEALLAVMSA SNDPTTKRDG EYEFTMPQPI 
PSYLIALAIG DLKFKAMGER TGVYAEPALL ESAAKEFEDT EAMLEVTEET YGPYQWDRYD 
LLILPPSFPF GGMENPRLSF ITPTVIAGDK SLVSLIAHEL AHSWSGNTVT NATWRDLWLN 
EGFTTYLTYR IMEMIYGHDR FKKEAVLGYQ DLENDIAALD ENDEILAIDL RGRNPDDVFS 
NIPYEKGALF LREIEQKIGR ENFDAFLMQY FKDFAFKSIT TDTFIAYLDE TLLKQYPDKL 
DAKRINTWIF EPGLPEDAPQ PESDAFTKID DTRTAWLSGD VNAADIETAQ WTVHEWLYFL 
NNMPETLTEP QLAELDKAFS LTSTKNNEIA HSWLMIAVEN NYQPAFDRLY TYLVSIGRNK 
LVKPLYRELS KTPDGKAFAK RAFEEAKPGY HPLTVRANEG YVN