Gene MADE_03133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03133 
Symbol 
ID6775999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3382938 
End bp3383606 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID642756583 
Producthypothetical protein 
Protein accessionYP_002127421 
Protein GI196157932 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGTTC GCATACCGTC TTTCAACCAT GCCTTCAAAA AAGATATCGA CGCGCTAATT 
GCTAAGCACC TAGACAAGAT TTTAAAAACC GAAAACCTCA TTATCGACAT CCGAGGAAAC 
GGTGGTGGTA GTGATGCCAG CTATGCTTCT TTGCTACCAA TTTTATACAC CAACCCTATT 
CGAACGGTAG GCGTGGAATA CTTATCAACC GAGCTTAACA ACTCTAGAAT GCTCGGCTTT 
TTGCAAAACC CTCATTTCAG TGAAGAAGAA AAGCAGTGGG CTAAAGACGG ATATGACATT 
CTTCAGCAAC ACATTGGTAG CTACATCAAT ATTGGTGAAG ATGTAACGGT AGAGAAATTT 
GATAAAATTG AACCCTTGCC AAAAAGTATA GGCGTATTTG TTGATTCAAG TAATGGCAGC 
ACCGCTGAGC AGTTCTTGCT GGCGGCTAAA CAAAGCAAGA AAGTAAAGCT GTTTGGGCAG 
ACCACAGCGG GTGTGCTCGA TATCTCTAAT ATGTATAAAA CTGATTCGCC GAGCGGTGCT 
TTTACCTTGC ATTACAGTTT AACCAAAAGT TTGCGCATTC CCCACATGGC CATTGATGGA 
GTGGGCATTC AGCCAGACTA TTATATTGAC GAAGAGATCC CTATTTATGA GTGGACGTCT 
TATACGTAA
 
Protein sequence
MLVRIPSFNH AFKKDIDALI AKHLDKILKT ENLIIDIRGN GGGSDASYAS LLPILYTNPI 
RTVGVEYLST ELNNSRMLGF LQNPHFSEEE KQWAKDGYDI LQQHIGSYIN IGEDVTVEKF 
DKIEPLPKSI GVFVDSSNGS TAEQFLLAAK QSKKVKLFGQ TTAGVLDISN MYKTDSPSGA 
FTLHYSLTKS LRIPHMAIDG VGIQPDYYID EEIPIYEWTS YT