Gene MADE_03097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03097 
Symbol 
ID6777732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3352512 
End bp3353075 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID642756546 
Productputative Fimh-like protein 
Protein accessionYP_002127385 
Protein GI196157896 
COG category 
COG ID 
TIGRFAM ID[TIGR02145] Fibrobacter succinogenes major paralogous domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG TAGTCAATGT TAAAAAACGT AACAGCCACG TGCTATCTTC AATGAAAACC 
CTTTTTGCTT CAGCGCTTTT GGCCTGTACG TCACTGTCCA CGTTCGCTCA GGAGTGTTTG 
TCTGATGGTC TTGAGACCAC GCCAAACGAT AATTTTGAAG CGGTTACCAC CAGTAGTTTG 
TTAGATACGA CAACAGATTT GGTTTGGAAG CGCTGCGCAG AAGGGCAAAC ATGGGATGGT 
TCTACATGTA GCGGCGAAGC GGTTAAGTAT ACGTGGCAGC AAGCGCTAGT TTTAGCTCAC 
GAAGCAAGTA ACGATGATTT ACTGGGGTGG CGTTTGCCTA ACGTAAAAGA GCTAGCGACG 
CTCACTGAGC GAGATTGCGT TCGCCCAGCA ATTAACAGCT CACTGTTCCC GGCTACACCA 
CCGGATGACT TTTGGACATC TACGCCTTCT GCAGATGACC CCGATCGCGC GTGGGTTGTG 
GCATTCTTTA ATGCCAGTCA CTCAATCAAA GAGAAAGACC GCTTTATCTA TGTACGTTTG 
GTTCGAACTT ACACAAACGA ATAA
 
Protein sequence
MNKVVNVKKR NSHVLSSMKT LFASALLACT SLSTFAQECL SDGLETTPND NFEAVTTSSL 
LDTTTDLVWK RCAEGQTWDG STCSGEAVKY TWQQALVLAH EASNDDLLGW RLPNVKELAT 
LTERDCVRPA INSSLFPATP PDDFWTSTPS ADDPDRAWVV AFFNASHSIK EKDRFIYVRL 
VRTYTNE