| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03093 |
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| Symbol | |
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| ID | 6777787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3348164 |
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| End bp | 3349390 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756542 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_002127381 |
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| Protein GI | 196157892 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTCG AAGAACTCGA ATTAGACGAT GCGCTGTGTC ACGCAGCAGC AGATATGGGG
TTTGAAGCTC CAACTAACAT TCAAGAATTG GTGATCCCAC ACGCGCTAGA CGGCCGAGAT
ATTTTAGCGT CTGCGCCAAC TGGTACAGGT AAAACCGCTG CATTCTTATT GCCAGCCTGT
CAGTTTTTAC TCGACTACCC GCGCAAACAG CCGGGTGCGA CACGTATTTT GATCTTAACG
CCAACCCGCG AACTGGCTTT GCAGGTTTAC GAGCAAGCGG TTGCCATTAC CAAGCACACC
CAGCTTGTGT GTGGAGTAAT TACTGGCGGT ATTAACTACG GCACAGATAA AGAGACGCTT
AGCAAGAACT TAGATATTCT TGTCGCCACA CCAGGCCGTC TTCTTGAACA CATTGAAAAA
GAAGCGGCAG ACTGTCGCGA TATTGAATGT TTAATTCTTG ATGAAGCCGA CCGTATGCTG
GATATGGGCT TCTCGACTGT GGTGAACCAA ATTGCGGCGG AAGCGCGCTG GCGCAAGCAG
AACCTGCTGT TCTCGGCCAC CCTTGAAGGT AAAGGTGTTA AGACCTTCGC TCACGACATT
CTTAATAACC CTGAAATTGT TGAAGCAAAC CCGTCACGCA AAGAGAAGAA TAAAATTCAC
CAGTGGTATC ACCTTGCTGA TGACATGAAC CACAAGCAAG CTCTTCTGGT GAACATATTG
AAGCAGGAAA CTACAACATC GGCGGTGGTA TTTGTAAAAA CCCGCGACCG CCTGCAAATG
CTAAAAGACT TTCTAGCTTC ACAAGATATT CAGGTGTGCT GGTTACAAGG TGAAATGCCG
CAGGACAAAC GCAACGCCGC TATGGCCCGC TTTAAAAATG GCGAAGTCCC TATTTTGTTA
GCGACTGATG TAGCTGCCCG TGGCATTGAC GTGCCAAACG TCAGTCATGT TATTAACTTT
GATATGCCGC GCAAAGCCGA TATTTACGTT CACCGTATTG GTAGAACCGG CCGCGCAGGC
GCTAAAGGCA CGGCTATTTC ACTGGTTGAA GCACACGACT TTGAAATGGT AACCAAAGCA
GCGCGTTACA TGGGCGAGCC TTTAAAAGCC CGTGTTATCG ACGAGCTACG CCCTAAAAAC
AAAACGCCTA AAATTGGCCC GAAAAAGAAA AAAGTGAAGG CCAAAGATAA AACTAAGGCG
AAAGCCAAGC CTAAGAAGAA AAAGTAA
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| Protein sequence | MTFEELELDD ALCHAAADMG FEAPTNIQEL VIPHALDGRD ILASAPTGTG KTAAFLLPAC
QFLLDYPRKQ PGATRILILT PTRELALQVY EQAVAITKHT QLVCGVITGG INYGTDKETL
SKNLDILVAT PGRLLEHIEK EAADCRDIEC LILDEADRML DMGFSTVVNQ IAAEARWRKQ
NLLFSATLEG KGVKTFAHDI LNNPEIVEAN PSRKEKNKIH QWYHLADDMN HKQALLVNIL
KQETTTSAVV FVKTRDRLQM LKDFLASQDI QVCWLQGEMP QDKRNAAMAR FKNGEVPILL
ATDVAARGID VPNVSHVINF DMPRKADIYV HRIGRTGRAG AKGTAISLVE AHDFEMVTKA
ARYMGEPLKA RVIDELRPKN KTPKIGPKKK KVKAKDKTKA KAKPKKKK
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