| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03087 |
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| Symbol | |
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| ID | 6777749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3340812 |
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| End bp | 3342212 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642756536 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_002127375 |
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| Protein GI | 196157886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGA CCTTATATGA CAAAGTGTGG CAAGCGCACA TTATCGACCA AATCGGTGAA
GACAGCTTAA TTTATATCGA CCGTCATTTA ATTCACGAAG TGACGTCGCC GCAGGCATTC
GCGGGCTTAA ACGAAAAGGG CCGCAAAGTA CGTCGTCCAG ATCGTACTGT TGGCACTATG
GATCACAGTA TATCAACCCG TTCATTGGCA ATTGATGCGT GCGGCCCGGC TAACGCGCTG
CAGCTTCAAA CCTTGGCTAA AAACTGTGAA GAGCATAATA TTCAGCTTTT TCCTGTTGGC
CACCAAAAGC AAGGCATTGT GCATGTTATG GGGCCGGAAC TTGGCTTAAT TCAACCCGGC
ATGACAGTAG TGTGCGGTGA TTCACATACC GCTACCCACG GCGCATTTGG TGCGCTTGCT
TTCGGTATTG GTACGTCTCA AGTCGAGCAT GTACTGGCTA CGCAAACCCT TAAGCAAAGC
CGTGCGAAAA GCATGCTGAT TAATGTAAAC GGTAAACTAC CCGTTGGCAT TACCGCAAAA
GACATCATTC TTGCCATTAT TGGCAAAATT GGCCACGCTG GCGCAACCGG TCATGTTATT
GAATACGCGG GTGAAGCGAT TCGCGGTTTA AGCATGGAAG AGCGCATGAC TGTGTGCAAC
ATGAGTATTG AAGCGGGTGC CAAGGCAGGG CTAGTTGCGC CAGATGAGAA AACCTTTGCC
TACCTTGAGG GTCGCGAATA CGCACCAAAA GGCCAAGACT GGGAAGATGC GGTAGCCTAC
TGGAAAACGC TCTACACTGA AGAAGGCGCC AAGTTTGATA CTGTGGTTGA ACTTGAAGCG
GCAGATATTG CTCCACAGGT TACTTGGGGT ACAAACCCAG GCCAGGTTAT TGGCGTAAAC
ACACCAGTAC CAGCCCCTGA AGATTTCAGC GATCCAATTG AAAAAGAAAG CGCGGTAAAA
GCGCTGGAGT ACATGGGCTT AAAGCCAGGC GAAAAGCTTG CTGATATCCC AGTAAACCAC
GTATTCATTG GCTCTTGTAC CAACGGACGT ATTGAAGACA TGCGCGCAGC GGCACAAGTT
GCTAAACGCG GTAAAGTCGC CGACTCAGTG ACTGCCATTG TAGTACCGGG TTCGGGCGCG
GTTAAACGCC AAGCAGAAGC GGAAGGCCTA GATAAGATAT TTACTGACGC TGGCTTTGAA
TGGCGCTTAC CGGGCTGCTC AATGTGCCTT GGTATGAACG ACGACAAACT AGTAGCAGGC
GATAGATGTG CCTCTACCAG TAACCGCAAC TTCGAAGGTC GCCAAGGGCG TGGAGCGCGC
ACGCATTTGG TTAGCCCAGC AATGGCTGCG GCCGCGGCTA TCACTGGCCG TTTTGCTGAC
GTTAGAGATT ATCAGGAGTA A
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| Protein sequence | MAKTLYDKVW QAHIIDQIGE DSLIYIDRHL IHEVTSPQAF AGLNEKGRKV RRPDRTVGTM
DHSISTRSLA IDACGPANAL QLQTLAKNCE EHNIQLFPVG HQKQGIVHVM GPELGLIQPG
MTVVCGDSHT ATHGAFGALA FGIGTSQVEH VLATQTLKQS RAKSMLINVN GKLPVGITAK
DIILAIIGKI GHAGATGHVI EYAGEAIRGL SMEERMTVCN MSIEAGAKAG LVAPDEKTFA
YLEGREYAPK GQDWEDAVAY WKTLYTEEGA KFDTVVELEA ADIAPQVTWG TNPGQVIGVN
TPVPAPEDFS DPIEKESAVK ALEYMGLKPG EKLADIPVNH VFIGSCTNGR IEDMRAAAQV
AKRGKVADSV TAIVVPGSGA VKRQAEAEGL DKIFTDAGFE WRLPGCSMCL GMNDDKLVAG
DRCASTSNRN FEGRQGRGAR THLVSPAMAA AAAITGRFAD VRDYQE
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