Gene MADE_03086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03086 
Symbol 
ID6777746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3339705 
End bp3340802 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content49% 
IMG OID642756535 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002127374 
Protein GI196157885 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGT ATTCAATTGC CGTACTAGCC GGAGACGGTA TCGGCCCAGA AGTTATGCAG 
GAAGCCAATA AGGTTTTAGA TGCAGTCGAA AAGAAGTTTA ACGTTAGCCT AAACCGAACT 
GCATACCCTG TGGGTGGCTA TGCCATTGAT ACTGAAGGTG AAGCCCTGCC TTCTAAAACT 
TTGCTAGGCT GCGAACAAGC CGATGCGATT TTGTTTGGCA GTATCGGCGG CCCTAAATGG 
GATACATTAC CGTTAGAGCA GCGCCCAGAA CGTGCTGCGT TGCTTACCCT TCGCAGCCAC 
TTTGACCTGT TCAGTAATCT TCGCCCTGCA CGCATTTATC CTGGTCTTGA AAGCCTGTCG 
CCGCTACGCG AAGACATTGC CAAGTCAGGG GTAGATGTTT TAGTTGTGCG CGAACTGACT 
AGCGGTATTT ACTTTGGCCA GCCAAAAGGT CGTGAAGGTG AAGGCGAAGA GGAATTCGCT 
TATGACACCA TGCGCTACAG CAAACGGGAA ATTCGCCGTA TTGCTATTGC AGCGTTTGAA 
GCAGCGCAAA AGCGTCGCGG TAAAGTAACC TCTGTAGATA AAGCAAACGT ATTGGTCACA 
AGCCGTTTAT GGCGCGAGAT TGCCGAAGAA GTAGCAAAAG ACTACCCAGA CGTAGAGCTT 
GACCATATCT ACATCGACAA CGCGACTATG CAAATTATGA AGAACCCGGC TCAGTTCGAC 
GTGATGCTAT GCTCTAACCT GTTTGGCGAC ATCGTTTCTG ACGAATGTGC GATGATGACC 
GGCTCTATGG GCTTGTTACC GTCGGCAAGT ATGAACGAAG ATGGCTTTGG CCTTTATGAA 
CCTGCAGGCG GTTCAGCCCC CGATATCGCA GGTCAGGGTA TCGCTAACCC TATCGCACAA 
ATTTTATCAG CCGCTATGAT GCTGCGTTTT AGCATGAACT TAGGTGATGC CGCAGACGCC 
ATTGAAAAAG CGGTCGTCGC AACACTAGAA GCAGGTGTAC TGACAGGCGA GTTACTCCCT 
GCTGAACAAC GTGAAAATGC AGCAAGCACA TCGCAAGTAG GCGATGAAAT TGTAAAACAA 
TTAATGGCGC AGGAGTAA
 
Protein sequence
MSQYSIAVLA GDGIGPEVMQ EANKVLDAVE KKFNVSLNRT AYPVGGYAID TEGEALPSKT 
LLGCEQADAI LFGSIGGPKW DTLPLEQRPE RAALLTLRSH FDLFSNLRPA RIYPGLESLS 
PLREDIAKSG VDVLVVRELT SGIYFGQPKG REGEGEEEFA YDTMRYSKRE IRRIAIAAFE 
AAQKRRGKVT SVDKANVLVT SRLWREIAEE VAKDYPDVEL DHIYIDNATM QIMKNPAQFD 
VMLCSNLFGD IVSDECAMMT GSMGLLPSAS MNEDGFGLYE PAGGSAPDIA GQGIANPIAQ 
ILSAAMMLRF SMNLGDAADA IEKAVVATLE AGVLTGELLP AEQRENAAST SQVGDEIVKQ 
LMAQE