Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03079 |
Symbol | recA |
ID | 6777667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3329252 |
End bp | 3330298 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756528 |
Product | recombinase A |
Protein accession | YP_002127367 |
Protein GI | 196157878 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.353429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGATA ACAAATCAAA AGCTTTAACC GCCGCAGTAG GCCAAATTGA AAAGCAATTT GGTAAAGGCG CTATCATGCG CTTAGGCGAC AACCAAGCCA TGGATATTGA AGCAATTTCT ACTGGCTCAC TAACCATTGA TATCGCTCTA GGCATAGGCG GTTTACCGTG TGGTCGTGTT GTAGAAATTT ACGGCCCTGA ATCATCAGGT AAAACCACGC TAACTCTTCA AGTTATCGCT GAAGCGCAGA AAAATGGTAA AACCTGTGCG TTCGTTGACG CTGAACACGC GCTAGACCCT GTATACGCCG AAAAGTTAGG CGTAAACATT GACGAGCTAT TGGTATCCCA GCCTGACACT GGTGAGCAAG CGTTAGAAAT TTGCGACATG TTAGTTCGCT CTGGTGCCGT AGACGTCGTT ATTGTTGACT CGGTTGCTGC ACTTACACCA AAAGCCGAAA TTGAAGGTGA CATGGGTGAT TCTCACGTTG GTCTTCAGGC CCGCTTGATG TCACAGGCGC TGCGTAAGCT TACGGCAAAC ATTAAGCGTT CAAACACCCT TTGTATCTTC ATTAACCAAA TTCGTATGAA GATTGGTGTA ATGTTTGGTA ACCCAGAAAC GACAACGGGT GGTAACGCGC TTAAGTTCTA CTCTTCTGTT CGTCTAGACA TTCGCCGTAT TGGTGCAGTT AAAGAAGGCG ATGAGGTAGT GGGTAACGAA ACCCGCGTGA AGGTCGTGAA AAACAAGGTT GCGCCACCGT TCAAACAAGC TGAATTTATG ATCCGCTACG GTGAAGGTAT CAGCAAAGAA GCAGAGCTTA TTGACCTAGG TGTTAAGCAG AAGCTTGTTG ATAAAGCCGG CGCTTGGTAC AGCTATAAGG GTGACCGTAT TGGTCAAGGT AAAGCAAACG TAATGAAGTA CCTTAAGGAA CACCCAGAGA CAGCAAACGA GATCGAAACG AAGATCCGCC AAGAACTATT GCTTTCTAAA ACAGTAAAGG CAGAAGAAGC ATTGCCGCAG GGTGAAGACG ACGTACTTCC TGAGTAA
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Protein sequence | MDDNKSKALT AAVGQIEKQF GKGAIMRLGD NQAMDIEAIS TGSLTIDIAL GIGGLPCGRV VEIYGPESSG KTTLTLQVIA EAQKNGKTCA FVDAEHALDP VYAEKLGVNI DELLVSQPDT GEQALEICDM LVRSGAVDVV IVDSVAALTP KAEIEGDMGD SHVGLQARLM SQALRKLTAN IKRSNTLCIF INQIRMKIGV MFGNPETTTG GNALKFYSSV RLDIRRIGAV KEGDEVVGNE TRVKVVKNKV APPFKQAEFM IRYGEGISKE AELIDLGVKQ KLVDKAGAWY SYKGDRIGQG KANVMKYLKE HPETANEIET KIRQELLLSK TVKAEEALPQ GEDDVLPE
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