Gene MADE_03079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03079 
SymbolrecA 
ID6777667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3329252 
End bp3330298 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content46% 
IMG OID642756528 
Productrecombinase A 
Protein accessionYP_002127367 
Protein GI196157878 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.353429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATA ACAAATCAAA AGCTTTAACC GCCGCAGTAG GCCAAATTGA AAAGCAATTT 
GGTAAAGGCG CTATCATGCG CTTAGGCGAC AACCAAGCCA TGGATATTGA AGCAATTTCT
ACTGGCTCAC TAACCATTGA TATCGCTCTA GGCATAGGCG GTTTACCGTG TGGTCGTGTT
GTAGAAATTT ACGGCCCTGA ATCATCAGGT AAAACCACGC TAACTCTTCA AGTTATCGCT
GAAGCGCAGA AAAATGGTAA AACCTGTGCG TTCGTTGACG CTGAACACGC GCTAGACCCT
GTATACGCCG AAAAGTTAGG CGTAAACATT GACGAGCTAT TGGTATCCCA GCCTGACACT
GGTGAGCAAG CGTTAGAAAT TTGCGACATG TTAGTTCGCT CTGGTGCCGT AGACGTCGTT
ATTGTTGACT CGGTTGCTGC ACTTACACCA AAAGCCGAAA TTGAAGGTGA CATGGGTGAT
TCTCACGTTG GTCTTCAGGC CCGCTTGATG TCACAGGCGC TGCGTAAGCT TACGGCAAAC
ATTAAGCGTT CAAACACCCT TTGTATCTTC ATTAACCAAA TTCGTATGAA GATTGGTGTA
ATGTTTGGTA ACCCAGAAAC GACAACGGGT GGTAACGCGC TTAAGTTCTA CTCTTCTGTT
CGTCTAGACA TTCGCCGTAT TGGTGCAGTT AAAGAAGGCG ATGAGGTAGT GGGTAACGAA
ACCCGCGTGA AGGTCGTGAA AAACAAGGTT GCGCCACCGT TCAAACAAGC TGAATTTATG
ATCCGCTACG GTGAAGGTAT CAGCAAAGAA GCAGAGCTTA TTGACCTAGG TGTTAAGCAG
AAGCTTGTTG ATAAAGCCGG CGCTTGGTAC AGCTATAAGG GTGACCGTAT TGGTCAAGGT
AAAGCAAACG TAATGAAGTA CCTTAAGGAA CACCCAGAGA CAGCAAACGA GATCGAAACG
AAGATCCGCC AAGAACTATT GCTTTCTAAA ACAGTAAAGG CAGAAGAAGC ATTGCCGCAG
GGTGAAGACG ACGTACTTCC TGAGTAA
 
Protein sequence
MDDNKSKALT AAVGQIEKQF GKGAIMRLGD NQAMDIEAIS TGSLTIDIAL GIGGLPCGRV 
VEIYGPESSG KTTLTLQVIA EAQKNGKTCA FVDAEHALDP VYAEKLGVNI DELLVSQPDT
GEQALEICDM LVRSGAVDVV IVDSVAALTP KAEIEGDMGD SHVGLQARLM SQALRKLTAN
IKRSNTLCIF INQIRMKIGV MFGNPETTTG GNALKFYSSV RLDIRRIGAV KEGDEVVGNE
TRVKVVKNKV APPFKQAEFM IRYGEGISKE AELIDLGVKQ KLVDKAGAWY SYKGDRIGQG
KANVMKYLKE HPETANEIET KIRQELLLSK TVKAEEALPQ GEDDVLPE