Gene MADE_03078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03078 
Symbol 
ID6776792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3328126 
End bp3328947 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content45% 
IMG OID642756527 
Productsodium ABC exporter ATP-binding protein 
Protein accessionYP_002127366 
Protein GI196157877 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG4555] ABC-type Na+ transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.403818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA TATCAGGTCT CGCTAAACGC TTTACGGTGG AAAACCCGAA AAAGCTTAGC 
GAACAAGAGA AGAAGGACCC GCGTTTAAAA GGGCGTTATT TTCAGTCAGT AAGGGATGTG
TCTTTTACTT GCGAAAAAGG TCAGGTTCTG GGACTGCTAG GGCCTAACGG CGCAGGTAAA
ACCACTACAT TGCGTATGCT TTCAACAGCG CTTAAACCCG ACAGCGGTAA AGTGCTCATA
GGTGGCGAGG ACGTACTTTC TAACCCAAAC ATTGCGCGAA AAAAGATTGG TTTTCTTTCC
AGTTCAACAG GTCTATACGG CCGTTTAAGT GGGCGTGAAA ATATTAGCTA CTTCGGTGAG
CTACACGGCA TTTCAAAAAA TGTGATTAAT GCACGTATTG AAGAGTTAGC TGACTTGCTC
GATATGCAAA CCTTCCTTGA TAGAAGAGCG GAGAATTTTT CATCAGGCAT GAAACAAAAA
GTGTCGATTG CCCGCGCTGT TATTCACGAG CCAGAACTGG TGGTACTTGA TGAACCTACA
ACCGGCCTTG ATATTATGGC AACCAGTACC GTTATGGAAT TTATCCAACG CCTTAAGGAT
AAAGGTACCC CGGTTATTTT CTCTACTCAC CATCTTGATG AGGTGCAAAC CCTTTGCGAC
AAGGTGACCG TGATTAACCA AGGGGAAACC GTATTTAACG ATTCGCTTGC CGCTTTTAGT
GCTTTGTCTG GCAATGAAGG GGCCAGCGGT CAGATGCACA AGAGCTTTCT AAAAACACTA
TCAATGGATA CTGAGGAGAC GGGCAATGTG GTTAATCTTT AA
 
Protein sequence
MIEISGLAKR FTVENPKKLS EQEKKDPRLK GRYFQSVRDV SFTCEKGQVL GLLGPNGAGK 
TTTLRMLSTA LKPDSGKVLI GGEDVLSNPN IARKKIGFLS SSTGLYGRLS GRENISYFGE
LHGISKNVIN ARIEELADLL DMQTFLDRRA ENFSSGMKQK VSIARAVIHE PELVVLDEPT
TGLDIMATST VMEFIQRLKD KGTPVIFSTH HLDEVQTLCD KVTVINQGET VFNDSLAAFS
ALSGNEGASG QMHKSFLKTL SMDTEETGNV VNL