| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03069 |
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| Symbol | |
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| ID | 6776846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3318673 |
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| End bp | 3320730 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756518 |
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| Product | Cytochrome c biogenesis factor |
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| Protein accession | YP_002127357 |
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| Protein GI | 196157868 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCCTG AAATTGGAAA TATCGCGCTA ACGTTGGCAT TAGTGCTCTC TATATTGTTG
GCAGTTTATC CGCTATGGGG TGCTCACCGT AAGCACGAAG CGTTAATGGC AACCGCCAAA
CCACTGGCAA TTGGCTTATT CACCTTCACG CTTATTGCCT ACGTGTGTTT AACGTACGCC
TTTGTTACTG ACGATTTTAG TGTGGCCTAC GTTGCGCAAC ACTCAAATAG CCGATTGCCC
ATTTACTATA AGATTACTGC TGTTTGGGGC GGTCATGAAG GCTCTTTCCT ACTGTGGGTA
TTGATGCTTT CAATCTGGAC CGTGGCAGTA GCAATATTCA GTAAGGGGAT ACCTCTTGCC
ATGGTCGCTA GAGTACTGTC GGTATTGGGC ATGGTAGGCA TTGGTTTTTA CTTATTTATG
CTGCTTACCT CAAACCCCTT TGACAGCATG CTACCGTTTT TCCCGGTCGA CGGGCGAGAT
CTTAATCCGC TGCTGCAAGA TTTTGGTATG ATTATTCATC CGCCTATGCT CTATATGGGG
TACGTAGGCT TTTCTGTTGC CTTTGCGTTC GCTATTTCTG CGTTAATTTC GGGGCAACTA
GATTCGACAT GGGCGCGGTG GTCTCGTCCT TGGGTGATTG CAGCGTGGGC CTTTTTAACC
GTGGGAATTG CCCTAGGTAG CTGGTGGGCA TATTACGAAC TCGGCTGGGG CGGCTGGTGG
TTTTGGGACC CGGTAGAAAA CGCATCCTTT ATGCCATGGC TTGTAGGCAC GGCGCTCATG
CATTCGCTGG CAGTGACCGA AAAGCGAAAA GCGTTTAAAT CATGGACAGT GCTGCTTGCT
ATTGCTGCAT TTAGTTTGAG TTTACTAGGC ACTTTCTTAG TACGTTCCGG AGTTATTGTT
TCGGTGCACT CTTTTGCAAG CGATCCTACT CGAGGCTTGT TCATCTTGGG CATATTGATT
GTACTTAGCG GTTTTGGGTT GCTGCTTTAT GCCATGCGTG CAGCCTCGCT TAAAAGCCCT
GGGCGCTACC AAGCGTTTTC TCGAGAAGTG CTGTTAATGG GCAACAATGT CTTTCTGTGC
GCAGCAACAT TAGTTGTTCT TCTCGGTACG CTACTGCCCC TTGTTCACAA AGAGTTAGGC
TTAGGCAGTA TTTCTGTAGG CGCGCCGTTC TTTAACCAAA TGTTTACGCT TCTCATTGTG
CCTTTTGTAT TAATGCTGGG TTTAGGTCCA CTAACGCGCT GGAAACAGCA AAAAGCCAGC
GAACTGCAAA AACAACTATT GGTCGCAGGC GGTATTGCAC TAAGTGCAGG TGTACTAGTG
AACTTTGCTT ACGACGAACC CACTTACATG GGGGTACTGG GCATGGTGCT GGTTTTCTGG
ATCCTCGTCA CCACGGTACA AGAGGTAATG CAGCGCTTAG CGGCTATGCC TTCGTCGAAC
ACCGAGAATG CATCAGTAAT AGCTAAACTT CGCAAGCTTA CGCCAAGTCA CTGGGGCATG
GTGCTAGGCC ATGTGGGCTT TGCTATCTGT ATTATTGGCA TTACGCTGGT TTCCAATTAT
GAACTTGAGC GCGACGTACG TATGGATATC GGCGATACCG TCTCGCTGGG TGGCTATGAC
TTTAGCTTTA GAGATGTACG GAAGGTGGAA GGTCCGAATT TTAATGCAGA TAAAGGCATA
TTCGATGTTT ATAAAAATGG TGAAATGATA GCGCATCTAG AGCCAGAGAA ACGTTTGTAC
ATTGTGCAGC GCATGCCCAT GACAGAAGCG GCCATCCACT CAAACTTGGC GCGTGATCTA
TTCATTGCCA TGGGCGAGCC GTTAGACAAT GGCGCATGGG CTATTCGTAT TTACATTAAA
CCGTTTGTTA TCTGGCTATG GGCGGGTGCG GTTGTTATGG CGATAGGCGG TATTTTTTCT
ATTAGTGATA AGCGCTACCG CATGGCGAAA GTGAAAAAGT TGAAACGTGT ACTTGGCAGT
AAATCTGTAG CTTCAACAGG TACACCAAAT ACCCACGCCT CTGCCGTGTC ACGAGTATCC
ACAAAAGGAG ATGCATAA
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| Protein sequence | MVPEIGNIAL TLALVLSILL AVYPLWGAHR KHEALMATAK PLAIGLFTFT LIAYVCLTYA
FVTDDFSVAY VAQHSNSRLP IYYKITAVWG GHEGSFLLWV LMLSIWTVAV AIFSKGIPLA
MVARVLSVLG MVGIGFYLFM LLTSNPFDSM LPFFPVDGRD LNPLLQDFGM IIHPPMLYMG
YVGFSVAFAF AISALISGQL DSTWARWSRP WVIAAWAFLT VGIALGSWWA YYELGWGGWW
FWDPVENASF MPWLVGTALM HSLAVTEKRK AFKSWTVLLA IAAFSLSLLG TFLVRSGVIV
SVHSFASDPT RGLFILGILI VLSGFGLLLY AMRAASLKSP GRYQAFSREV LLMGNNVFLC
AATLVVLLGT LLPLVHKELG LGSISVGAPF FNQMFTLLIV PFVLMLGLGP LTRWKQQKAS
ELQKQLLVAG GIALSAGVLV NFAYDEPTYM GVLGMVLVFW ILVTTVQEVM QRLAAMPSSN
TENASVIAKL RKLTPSHWGM VLGHVGFAIC IIGITLVSNY ELERDVRMDI GDTVSLGGYD
FSFRDVRKVE GPNFNADKGI FDVYKNGEMI AHLEPEKRLY IVQRMPMTEA AIHSNLARDL
FIAMGEPLDN GAWAIRIYIK PFVIWLWAGA VVMAIGGIFS ISDKRYRMAK VKKLKRVLGS
KSVASTGTPN THASAVSRVS TKGDA
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