| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03062 |
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| Symbol | |
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| ID | 6779143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3312261 |
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| End bp | 3313712 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756511 |
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| Product | putative proton-dependent peptide transporter |
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| Protein accession | YP_002127350 |
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| Protein GI | 196157861 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000506345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGGAGC GCATGAGCTA CTACGGCATG CGCGCGCTAC TTGTTCTTTT TATGACTGCA
AGCTTACAAA CCCAAGGTTT GGGTTTTACT GTGGCAACAG CAGGGGCAAT TTACGGTCTC
TACACCGGTG CGGTATACTT TTTAGGGTTA CCCGGCGGTT GGCTAGCTGA CCGCTTGATT
GGCGGGAAAA AGGCGGTGTG GTACGGTGGA ATTATCATCT TCGCGGGCCA CGTAGTGCTT
GCCATTGACT TGCAAAACCT GTTCTTCGTG GGCCTTATTC TTGTAGCTTC AGGTACAGGC
TTACTTAAAC CCAATATTTC TGCCATGGTT GGTCAACAAT ACGGTGACGA CGATGGACGC
CGTGATAGTG GCTATGCTCT GTACTACATG GGTATCAACA TTGGCTCACT TATCGCCTAC
CTTGTTACAG GCTATCTTCA GGAAAACTGG GGCTGGCACT ATGCCTTTGG CGCAGCCGCT
ATTGGTATGG CGATCGGTCT TATTCAGTAT TACTTTAGCA ACCGCTCACT GTCACCAGAC
TCTGTTGCGC CGGCAAACCC ATACCAAGGC GCAGCTAGAC AACGCGCGTG GATGGGCGTA
TATGGCGTCT TAGCCATTGC TGCTGCAGTA ATTGTACTGG CACATATGGG CACCATTGTT
ATTGAACCAG TGGCACTTGC TCAGCAAGTC GCGGTGGTCT TTACTGTTAT TTTCTTCCTT
TACTTCGGGT TTATTTATTT CAAAGGCCAA CTCAGTGATA ACGAGAAAAA ACGCATGTGG
GCACTGTTTT TAGTGTGTGT TGCATCGGCG TGCTTCTGGT CTGGTTTTGA ACAAGCAGGC
TCTTCACTTA ACCTATTTGC GCAAAACTAT ACTGATCGCG TTCTTGAAAG CGGGTCATTA
TTAACCTCAT GGTTTGGGAT GGACGCTATT CCAACCGTAT GGTTCCAGCT CTCAAACTCA
CTGTTCATTA TCATTTTGTC GCCTTTTTTC GCTGCCCTTT GGATAAACCT CGCCAAGCGA
ATGATAGACC CGTCTTACAC CATCAAATGT GCAGTGGGTA TCGTTATTAT GGCATCGGGC
TTCTTGGTGA TGTTTATGGC GTCGCAATAC GCAGCTCAAG GCCTTAAAGT AGCGCCTATG
TGGCTAGTTA CGACTTACTT TCTACACACG GTTGGTGAGC TTTGCTTAAG CCCAGTTGCA
CTTAGTGCAG TAAGTAAACT TTCGCCGAAG CGTTTCGCAG GGCAAATGAT GGGGGTATTC
GTACTGACCT ACTCTATTGG TAACATCATT GCTGGCCTGC TTTCAGGGAA CTTCGACCCA
GAGAAAGTAG AGCAAATGCC GGACCTGTAC CTTCAAATTG CCTTGTTTAG CATCGCGATC
GCTATAGTGA TTGGCTTGAT GAGCTTTAAA TCTCGTTTCT GGGAAAAAGC AGGCATTGAA
GAAAAAGCGT AA
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| Protein sequence | MWERMSYYGM RALLVLFMTA SLQTQGLGFT VATAGAIYGL YTGAVYFLGL PGGWLADRLI
GGKKAVWYGG IIIFAGHVVL AIDLQNLFFV GLILVASGTG LLKPNISAMV GQQYGDDDGR
RDSGYALYYM GINIGSLIAY LVTGYLQENW GWHYAFGAAA IGMAIGLIQY YFSNRSLSPD
SVAPANPYQG AARQRAWMGV YGVLAIAAAV IVLAHMGTIV IEPVALAQQV AVVFTVIFFL
YFGFIYFKGQ LSDNEKKRMW ALFLVCVASA CFWSGFEQAG SSLNLFAQNY TDRVLESGSL
LTSWFGMDAI PTVWFQLSNS LFIIILSPFF AALWINLAKR MIDPSYTIKC AVGIVIMASG
FLVMFMASQY AAQGLKVAPM WLVTTYFLHT VGELCLSPVA LSAVSKLSPK RFAGQMMGVF
VLTYSIGNII AGLLSGNFDP EKVEQMPDLY LQIALFSIAI AIVIGLMSFK SRFWEKAGIE
EKA
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