| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03061 |
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| Symbol | |
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| ID | 6779135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3310853 |
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| End bp | 3311971 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642756510 |
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| Product | putative capsule polysaccharide export system inner membrane protein |
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| Protein accession | YP_002127349 |
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| Protein GI | 196157860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.244553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAT CTCTTACACA GCTCAATGCC CTTCTTAGCA AGAACAAAGC ACTTATCCTT
GTACTTCCTT GGGTACTCTA TGCATTGTAT CTTGTTCTAT GGGCGGCGCC TCAATACGAA
AGCCATAGCC AACTTATCAT TAAATCAAGT GATGGAGGCA GCAGTTTCGA CCCGTCGTCC
TTGCTAATGG CCGCCGGTGT TTCTGGCGCT TCAGGTGGCA CTGAAAGTCA ACTTGTCGAA
GCCTACATAC AGTCTGCGGA TATGATTAAG TACCTCGATG AAACCATTGG ACTTAGAGAA
CACTACATGT CTGATAAAGC TGATATGTTT AGTGGCCTTT CGTCTTCGCA TAAACAGGAA
GATTTTTACA AGTTTTATCT CGACCATATT GAAGTGAGCG TAGATTCCGC GTCGTCTGTA
ATTAGCTTGC GTACACGGGC TTTCGATGCT GAATATGCAA AAATCATAAA CCAAGCGATT
GTCGATAAAG CGGAAGAGTT CATCAACAAC ATCAATAACG ATCTCGCTAA GTCAAAATTG
ACCTTTGCCA AAGGTGAACA CGAAATTGTT GAGCAAAAGC TTCAACAGGC TAAGACCGAG
ATTTTAAGTT TTCAATCTAA ATACAATGTA CTTGATCCGT CTGCAGAAGG CGCAGCTTTT
CAGCAAATCG CATTTTCTCT TCAAGCTACG CTTGCACAGA AAAAGGCCGA GCTAAGTACG
ATGTCAACCA TGATGTCTAA CGTGGCCCCT GAAGTGATAA ACATCAAACG CGAAATTGCC
GCACTTCAAA AAGAAGTAGA AAAGCAAAAA GAGCGAATTA GTACTGCAGA GGGGGAAAGT
GAGGCCCTAT CAGTAAGCGA ATTGATGGCG CAATACAGCA ACCTTCAGGT TCAATTACAG
CTTGCTATAC AAGCCTATTC GTCGTCATTA ATCACCTTAG AGAATGCACG AGTAGAGGCG
TATCAAAAGC TTCAGCACTT GGTAACGGTG GAGTCACCTA CGCTGCCAGA CGACAACGCT
TATCCCACGG TTATTTATAA CCTTGTTTTG TTCGGTGTTT CGCTACTGCT TATTTACGGT
ATTGTGCGAA TTGTGGTTGC CACTATCCGC GAACTTTAG
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| Protein sequence | MEKSLTQLNA LLSKNKALIL VLPWVLYALY LVLWAAPQYE SHSQLIIKSS DGGSSFDPSS
LLMAAGVSGA SGGTESQLVE AYIQSADMIK YLDETIGLRE HYMSDKADMF SGLSSSHKQE
DFYKFYLDHI EVSVDSASSV ISLRTRAFDA EYAKIINQAI VDKAEEFINN INNDLAKSKL
TFAKGEHEIV EQKLQQAKTE ILSFQSKYNV LDPSAEGAAF QQIAFSLQAT LAQKKAELST
MSTMMSNVAP EVINIKREIA ALQKEVEKQK ERISTAEGES EALSVSELMA QYSNLQVQLQ
LAIQAYSSSL ITLENARVEA YQKLQHLVTV ESPTLPDDNA YPTVIYNLVL FGVSLLLIYG
IVRIVVATIR EL
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