Gene MADE_03060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03060 
Symbol 
ID6777740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3310167 
End bp3310841 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content44% 
IMG OID642756509 
ProductKpsT protein 
Protein accessionYP_002127348 
Protein GI196157859 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAA TTGAGAATTT AACCAAGAGC TACCCCAGTA AAATGGGGCC TCAATATATT 
TTTAAAAATC TAAACTTTGA TTTCCCTACG GAAAACAATG TCGCCATTTT AGGTAAGAAC
GGGGCGGGTA AATCCACCCT TTTCCGCATG CTTGCGAAAA GCGAATACCC CGATAGAGGC
CGAGTTTTAA CCAACAAATC TATGTCGTGG CCGGTTGCGC TTCAAACTGG CGTACATCCG
CAGATGACAG GGCGTGAAAA CACCCGCTTT GTTGGCCGAA TTAATAATGT GGCTTCACTC
CCCGAATATG AAGAAAAAGT GCAGGAGTTT GCAGAGTTAG GCAAACGCTT TGATCTACCT
GTGCGCACTT ATTCCTCAGG TATGCGCGCA AAACTTGTTT TCGCTTGCTG CATGAATATC
AATTTCGATA TTTACCTGAT AGATGAAGCG ACATCCGTTG GTGACCCGCT TTTCAGAAAA
AAGGCTCGCT TGTCACTTAA AGAAAAAAGT GAACAGGCTG GGGTTATTAT GGTGAGCCAC
GAACTCGATC AGATACGAGA GTTCTGCACT TCGGCCGTCA TCATTGATGA TGGCAATCTC
ACTTATTATC ACGATCTCGA AGAAGGCATC GACGTTTACA CGCAGGATGC AGACAATAAG
AAATCACTCA AATAG
 
Protein sequence
MIRIENLTKS YPSKMGPQYI FKNLNFDFPT ENNVAILGKN GAGKSTLFRM LAKSEYPDRG 
RVLTNKSMSW PVALQTGVHP QMTGRENTRF VGRINNVASL PEYEEKVQEF AELGKRFDLP
VRTYSSGMRA KLVFACCMNI NFDIYLIDEA TSVGDPLFRK KARLSLKEKS EQAGVIMVSH
ELDQIREFCT SAVIIDDGNL TYYHDLEEGI DVYTQDADNK KSLK