| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03058 |
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| Symbol | |
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| ID | 6779126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3307559 |
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| End bp | 3309388 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756507 |
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| Product | capsular polysaccharide transport protein, putative |
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| Protein accession | YP_002127346 |
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| Protein GI | 196157857 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.715854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA TGAACATCAA AAACTCTTTT AAGGCGCTAA CTTACGCCGC GTACGCGGTG
GCTGTTTGCA GTGCATTTGT TAACCCTGCG TCTGCGCAAA GCGTCGAGCA ATTACAGCAA
TTAAGAGAGC GGGCACAGCA ATCGCAAAGC GGTGCAGCTA CCCCGTCGGT CTCTCCCTTA
AGCATTTCTA CCCAGCGTAC TTTGCCCGGA GCTACGGCTT CAGCCAATAC GATGGGCCAG
TTTTCTACAC AGCCTAGAAA CGGAGTAAAC CTGCCGGGCG AACCCACTAT CGATACTGTT
TTCCCAGCGC AAGCGCCTAT GGAAAACCCG CCTTTTGCGG CTAACTTATT TATCGGTGGC
TTCGAGTCTG AGCGCAGCTC GGGATTAAAC GACAATTACT TGATTGCCCC TGGCGATAAA
ATCTCAATTT GGCTTTGGGG TGCAGTAAAC TTTTCAGATG TTGTTACCGT GGATAATCAA
GGTAACATTT TTATTCCCAA TATTGGTCCT ATACGCATAG CAAATACACC CGCAGGCAGT
GTAAACCAAA CCGTAACTAG CAAAATCCGC CAAGTTTACA CCAACGACGT CAATGTTTAC
GTAAACCTTT TAACGTCAAC ACCGGTATCG CTTTATGTAT CAGGCCCAGT GCTAAGACCT
GGTCAATACG CAGGCCTAGC TTCAGATAGC GTTTTGTACT ATTTAAAGCG CGCTGGCGGA
ATTGACTTTC AACGGGGTAG TTTTAGACAA ATCGACATTG TACGAAACGG CAAAGTCGTG
GCCTCAGCAG ATTTGTACGC CTTTTTTAGA AGCGGAAAGC TGCCTGAAAT TTCTTTTAAG
GACGGCGATA CCATTTTAGT GCACCCTATT GGCAACACTA TTGTGGTTGA AACCGGCGCG
CGAAATAGTT TTACTTTCGA GTTTTTAAAC GAAGAGCTTA ACGGTGGTGT AGTTAATTAC
TTTGCACGCC CTGGTGAGTT TGCTTCTCAT GCTTCGGTTT CAGGAATTCG CAACAACAAG
CAATTTGCAC GCTACGTAAG CGTGAACGAG TTTGCGTCGC TTAAGCTAAG CGCCGGCGAC
ACTGTTGAGT ATATTGCCGA TCACGAACCT CAAATTTACC GCATTAATGT AGCAGGTGCT
TTCGCGGGGG CCTCTCAAGT AATGGTGGAT AAAGGCGCGA GACTCATTGA CGTACTCGAC
CACATCGAAG CTGATACCAC CCTTTCTGAT ACACAAAATA TCTACCTTTT AAGAGAAAGC
GTAGCGGTAA AACAAAAAGA GATTATCGAA GAAGGCCTAC AACGCCTAGA GCGAAGCATG
TACACGGCGC CAATTAGTTC AACTGGTGAA GGGGCGATTC GCGCCCAAGA AGCACAACTT
GTGGCTGACT TTATCACCCG CGCACGACAA GTTGAGCCTC AAGGCAGAGT GGTGGTATCT
GAAAATGGCG AGATTGCTAA CATTCTTCTT GAGCCTAATG ACACGATCGT TATTCCAGAA
GTCACCGACC TGATACACGT GGGCGGAGAA GTACTGCTTC CGCAGTCTGT CGTGTTTAAC
CCAGATGCAA CCACAGAAGA CTACGTTGCA TGGGCTGGTG GCTTTACCGA GCGGGCTGAA
GATGAACGTA TTCTTATCGT TCGTAAAAAC GGTAACGTTA CCTTTACTAG CGTGAACGAT
TCATTCTTAT CAAGCAATGA TAGTAAACTT GAGCCTGGCG ATCAGATCAT TGTGTTACCT
GCTATCGATA CGAAGATTTT GCAAGCGGTT AAAGACATTA CCCAAATCGT TTATCAAATT
GCGATTGCAG CTAACGTAGC TACTGATTAA
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| Protein sequence | MKFMNIKNSF KALTYAAYAV AVCSAFVNPA SAQSVEQLQQ LRERAQQSQS GAATPSVSPL
SISTQRTLPG ATASANTMGQ FSTQPRNGVN LPGEPTIDTV FPAQAPMENP PFAANLFIGG
FESERSSGLN DNYLIAPGDK ISIWLWGAVN FSDVVTVDNQ GNIFIPNIGP IRIANTPAGS
VNQTVTSKIR QVYTNDVNVY VNLLTSTPVS LYVSGPVLRP GQYAGLASDS VLYYLKRAGG
IDFQRGSFRQ IDIVRNGKVV ASADLYAFFR SGKLPEISFK DGDTILVHPI GNTIVVETGA
RNSFTFEFLN EELNGGVVNY FARPGEFASH ASVSGIRNNK QFARYVSVNE FASLKLSAGD
TVEYIADHEP QIYRINVAGA FAGASQVMVD KGARLIDVLD HIEADTTLSD TQNIYLLRES
VAVKQKEIIE EGLQRLERSM YTAPISSTGE GAIRAQEAQL VADFITRARQ VEPQGRVVVS
ENGEIANILL EPNDTIVIPE VTDLIHVGGE VLLPQSVVFN PDATTEDYVA WAGGFTERAE
DERILIVRKN GNVTFTSVND SFLSSNDSKL EPGDQIIVLP AIDTKILQAV KDITQIVYQI
AIAANVATD
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