| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03046 |
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| Symbol | |
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| ID | 6777652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3295405 |
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| End bp | 3296961 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642756495 |
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| Product | GGDEF domain protein |
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| Protein accession | YP_002127334 |
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| Protein GI | 196157845 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.444384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCAA AACAATTACA AACCCTAAAG CAAAACAACA CGCTTCTTTG TCAGTTTATT
GTAAAGCTCT CTGCGTTTTA TGAAGGCTTC TCGGACAAAA TAGATACCGA GCTAAAGGTG
TTGCGAGGGC ATCTTTCTGG CACCCCTAAC TTTAGCCTTG CTACTGTTAG TATTGAAAAG
CTAAACAAGT CGCTCCAGCA TCAGGAAATC ACCCTGCGCA AATACAGTGT TGATACGGTT
TCATCTCTTG AAGATGCCAT GAAACAACTG CAAAAAATTG TATTTGAAGA CAGTGAATTA
AAAGGCTTGA CCACGCAAGA GCTGATCAAA CTGAATCAGC CTATTGGCGA TATATTCAGT
ATCTATAAAC TCTATGCCAA AGCCATAGCG CTACACCGTA TTGCGCTAAA CAAAGAAATG
GTTGGACTAT CGCCAATTGA CTCAGGTGAA AATAGCCATA GCGGTAAGGA CGATACAAAA
GCTCACGCAC CGCAAGATGA AAATCCTCAC TATCGTTCAA TATTGGTTGA ACTTAACCAC
TTAATCACGT CTTACGCGCA GAAAAAACCT GACGACCATC AGCTGACCGA TATCAAACAG
CGTCTTGATG AGGGCATGGA TAAAGAACAG TTACTTAAAA GTTGTGTCGT AATTTTGCGA
ATGATTGTGC AAGACGCTAT GTCTGAAGCA AGTTTGACAG GCAAAGTAAT TCAAAGCCTT
CACCGCTCAC TTAGCGAAGT AAGTAACGAT GTAAGTAACA CCATAGAAAA TAGTAAGAGT
CAATTTGAGC AAAGGCAGGT GGGTAATGAA CAACTTAAAC GCCATATCAG CCATATCGAA
GAGGCCATGT CGGAAAGCGA GTCTTTTGAG GCATTAAAAG AACAAACGCA GTTTTGCGTT
GAAAAACTCG TCACAGCACT TAGCGAACAA CAAGATAGCG ACGAGCAGGG GCAAGAGGCA
ATAATGGCCC TGCTATCCTC AATGCAATCG AGAATAGATA CCCTGCAGCA GCAAACCAGT
GTTTACAAGA AGAAGCTTGC TGAACAGGCG ATGCAGAGTC GAACCGATCC ACTTACCCGC
CTTCCAAATA GACAGGCCTA TAACGAGAGA CTTGAGACAG CCTATACCCG TTTTAAATCT
AACGGTCATT CGCTGGCGGT TGCCGTAGTC GATATCGATC ACTTCAAATC TATAAACGAT
AGGTTTGGCC ATGCCACTGG GGATAAAACA CTGCAAGTCG TCAGTAAGTT TTTAAAGCAA
AGCCTCTCGG AAAATGATTT TGTTGCCAGA TGGGGCGGAG AAGAGTTTGT CATGCTTTTG
CCTGATGCCG AAATGGCGGA CATAGATAAA AAGCTTAATG AAGTTAGAAC CAAGCTAGCC
GCAATGCCAT TTAAGTTCAA ACAAGAAAAA GTAAAAATTA CCGCCTCTTT TGGCGCTACA
TGCTTTGGTC AGGATGACAC TACAGAGTCT GTCTTCGAGC GCGCCGATGA GTATCTTTAT
AAAGCTAAAC GAAGTGGTCG CAACCTTGTT GTCACCGATT TAAGCACTGA CGTGTAG
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| Protein sequence | MEAKQLQTLK QNNTLLCQFI VKLSAFYEGF SDKIDTELKV LRGHLSGTPN FSLATVSIEK
LNKSLQHQEI TLRKYSVDTV SSLEDAMKQL QKIVFEDSEL KGLTTQELIK LNQPIGDIFS
IYKLYAKAIA LHRIALNKEM VGLSPIDSGE NSHSGKDDTK AHAPQDENPH YRSILVELNH
LITSYAQKKP DDHQLTDIKQ RLDEGMDKEQ LLKSCVVILR MIVQDAMSEA SLTGKVIQSL
HRSLSEVSND VSNTIENSKS QFEQRQVGNE QLKRHISHIE EAMSESESFE ALKEQTQFCV
EKLVTALSEQ QDSDEQGQEA IMALLSSMQS RIDTLQQQTS VYKKKLAEQA MQSRTDPLTR
LPNRQAYNER LETAYTRFKS NGHSLAVAVV DIDHFKSIND RFGHATGDKT LQVVSKFLKQ
SLSENDFVAR WGGEEFVMLL PDAEMADIDK KLNEVRTKLA AMPFKFKQEK VKITASFGAT
CFGQDDTTES VFERADEYLY KAKRSGRNLV VTDLSTDV
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