Gene MADE_03029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03029 
SymbollspA 
ID6777597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3278419 
End bp3278967 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content43% 
IMG OID642756478 
Productlipoprotein signal peptidase 
Protein accessionYP_002127317 
Protein GI196157828 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.810128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGC TTTTTCGCGA AACTGGATTG CGATTTCTAT GGATAAGCGC GTTAGCGTTT 
ATCCTAGACC AATGGAGCAA ATATACGGTC ATCGACACTA TGTCGCTTTA TCAGTCGATT 
CAAGTGTTAC CGTTTTTTAA CTTCACGTAT GTTCATAACT ACGGTGCCGC ATTTAGCTTT 
CTAGAAAATG CGGGTGGCTG GCAGCGTTGG TTCTTCACTG CCATTGCTGT TGTGGTAAGT 
GTAGTGATTT TGTGGTGGCT TAAGCAGTCA CCTCGCTCGC AAAAAATGCT GCCGGTTGCC 
TTTGCCTTTA TTTTAGGTGG AGCACTAGGT AACGTTTACG ACCGTCTAGT TCATGGCTAT 
GTCATCGACT TTTTAGATTT CTACGTAAAT AATTACCACT GGCCAGCATT TAACATTGCC 
GACAGCGCAA TATTTATAGG CGCGGCTTTA CTTATTATCG ACATGTTTAA AAATGGCGAC 
AAGAAAAGTG AAGAAAACGG TGCGGAGTCA AAAGCAGGCT CTGCAAATAG TAGCGAAACC 
ATTAAGTAG
 
Protein sequence
MLKLFRETGL RFLWISALAF ILDQWSKYTV IDTMSLYQSI QVLPFFNFTY VHNYGAAFSF 
LENAGGWQRW FFTAIAVVVS VVILWWLKQS PRSQKMLPVA FAFILGGALG NVYDRLVHGY 
VIDFLDFYVN NYHWPAFNIA DSAIFIGAAL LIIDMFKNGD KKSEENGAES KAGSANSSET 
IK