| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03025 |
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| Symbol | |
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| ID | 6777581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3275067 |
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| End bp | 3275918 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642756474 |
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| Product | pilin like competence factor |
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| Protein accession | YP_002127313 |
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| Protein GI | 196157824 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.651646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA TGAGTCAGCG GGGCTTTTCA TTAGTCGAGC TCATGATTAC CTTAACCTTA
GGTTTAGTTA TTTCTGGTGC AATTATTCAA GTACTTGTTA GTAGCAGTGT TACTAACAAA
CTGAACCAAG CTGTCGCTCA AGTACAAGAG TCGGGGCGCT TTATCATGGG ACGCCTTTCC
GCTGAATTTT ACGAAGTAGG CCGCTATGAC CAGATTACCG CGAATGTAGA CACCTCAGTT
GATATAGTGG CCGAAGCTGC CTACGTTGAA AATCATCCTA TTGCTGTTGC TGGTGATTTT
GTTAACAACG CTACCTTAGG CAGCGTGCAA ACGTCTAGCG GCGGCAGCGA TAAACTTGTA
GTGAGCCTGC TAGGTCAAGA GGATTGCACG GGAAACCAAC ACGGTTACGC TTTAGGCAGC
GAATTTCATG TGGTTAATCA CTACTTTGTA AGCGGCAGTA CGCTCAAGTG TACCGGATAC
GATGGACGTG TTTTGCGGGG CTTAAAGCCG CAGTCGGTTT CACCAGTTAC TGTCACCCTT
CTCGATAACG TAGAAAGCTT TCAAGTGCAA TTTGGCATTT CCGACAGTAT CAGCACATCT
CAAGGGCAAG CCATCTCTTA CGTAACCGCC GATGAGATAA CGGGTTTAAG ATCACTTAAT
CAACAAGTTG TGTCACTGCG ATGGGCCCTC ATGATTAAAA GTTATCAAAA TGAAGTTAGG
CAAACTAACG CGCAAAAGTT TGCACTGTTA AACGAAGCGT CTAAAACCAT GGACACGGCG
CATTACTACC AGGTTTTCTC AAAGACGCTG GCACTTCGAA ATATGAAAAA TTTTGTCAGG
AGTTCACAAT GA
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| Protein sequence | MKHMSQRGFS LVELMITLTL GLVISGAIIQ VLVSSSVTNK LNQAVAQVQE SGRFIMGRLS
AEFYEVGRYD QITANVDTSV DIVAEAAYVE NHPIAVAGDF VNNATLGSVQ TSSGGSDKLV
VSLLGQEDCT GNQHGYALGS EFHVVNHYFV SGSTLKCTGY DGRVLRGLKP QSVSPVTVTL
LDNVESFQVQ FGISDSISTS QGQAISYVTA DEITGLRSLN QQVVSLRWAL MIKSYQNEVR
QTNAQKFALL NEASKTMDTA HYYQVFSKTL ALRNMKNFVR SSQ
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