Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03005 |
Symbol | |
ID | 6777449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3258678 |
End bp | 3258890 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642756456 |
Product | RNA polymerase sigma-70 factor |
Protein accession | YP_002127295 |
Protein GI | 196157806 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000186168 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTATCTG AAGAAATTGA AGAAACCCTT TTTAAAGTGG TAGAGAAATT GCCCGATGAT TTGCGCATGG CGATAACATT GCGCGAAATT GAAGGGTTGA GTTATGAAGA AATCGCAAAC GTAATGTCGT GTCCTGTTGG CACTGTGAGA TCACGTATTT TTAGGGCTCG CGAAGCGATA GATAAAGTTA TTCAGCCGCT GTTAGAGAAT TAA
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Protein sequence | MLSEEIEETL FKVVEKLPDD LRMAITLREI EGLSYEEIAN VMSCPVGTVR SRIFRAREAI DKVIQPLLEN
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