| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03002 |
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| Symbol | |
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| ID | 6776078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3256695 |
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| End bp | 3257681 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756453 |
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| Product | putative anti sigma E (sigma 24) factor, negative regulator |
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| Protein accession | YP_002127292 |
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| Protein GI | 196157803 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000479672 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA AAGCCGAAGT CGACCCTACG CAAGACGCAC CGCATAACTT TCAGGTAAAT
GAAACCCGTG ACGTTACAGC TTCTGCTGAG ACCCAGCCCC AGTCAGCAAG CCAGTGGTTA
GCCGAGCTTC AAAATATAAT TACTAATGCC AATTTCCAAG TATCGTTTGT TCAAACAATT
GCCGGTAAGG AAACGGTTCC TTACCTTTGG CGTCATGGCG TTATGGAAGA TGGCTCTGAG
TTAGAGCAAT TAAACCTTCA AAATGGCCCT GGTCGGGAGC TTATTCGCAT CAACGATGTG
GTTAGCGTTT TCGAGCCGGA TGTTCAGCCA TATAGCTTGC GCTCTAAACA TATCAATGGG
CCTATTCCCA GCGCCCTGCT TTATCACCCC GAGCAGCTTG CAGAAGCTTA TGAGTTTGTC
GCCGTAGGTA GAGCGCGTGT AGCCGGGCGC TCAGCGCAGC AAATAAGAAT TGTCAGCCGC
GATAATACCC GTTTTGGTTA TCAACTTTGG CTTGATGAGT CATCGGGAAT GCTGCTCAAG
TTAAACATGC TCGATTTACA GGGAGCATTG TTAGAACAAA TCCAAGTAAC AGCGTTTGCT
ATATCGCCTA CGCCAGCGGA GTACTTTTCA CGGATAAACG CGGCGTCGTT ACCGGCCCCA
ATGGCGTTAA GTACTGCACC CGCGCGAGCG CACAAGTGGG ACGTCACTTA TTTACCCGCG
GGAATGCGAG AGATAAAGCA AGATACAAGA CGACTAGCCT TAACCGGGCA AGTGGTAGAG
TATAAACTTT TCTCAGATGG GTTGGTGGAT GTGTCTGTAT ATGTTCAGCC CGCCGACGAT
GCGTTAGGTG AGACATTGGC ACTGCGCAAT GAAGTTAGTA CATTTTTGAC CTTAACAGAT
GGAAAAGCGC AAGTGACAGT GGTTGGTGAA ATACCACTTC AAACGGCTAA CGCGATTGCG
ACATCCTTAA GGCCTGTAAA TAACTAG
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| Protein sequence | MSDKAEVDPT QDAPHNFQVN ETRDVTASAE TQPQSASQWL AELQNIITNA NFQVSFVQTI
AGKETVPYLW RHGVMEDGSE LEQLNLQNGP GRELIRINDV VSVFEPDVQP YSLRSKHING
PIPSALLYHP EQLAEAYEFV AVGRARVAGR SAQQIRIVSR DNTRFGYQLW LDESSGMLLK
LNMLDLQGAL LEQIQVTAFA ISPTPAEYFS RINAASLPAP MALSTAPARA HKWDVTYLPA
GMREIKQDTR RLALTGQVVE YKLFSDGLVD VSVYVQPADD ALGETLALRN EVSTFLTLTD
GKAQVTVVGE IPLQTANAIA TSLRPVNN
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