Gene MADE_02998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02998 
Symbol 
ID6776794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3252654 
End bp3253340 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content47% 
IMG OID642756449 
Productribonuclease III 
Protein accessionYP_002127288 
Protein GI196157799 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.168876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGAA TTGATAAATA TCTTCGCTTA TACAAGGCGA TAGGCTACAC ATTTAACAAT 
GAAGCGTTGT TAGAACAAGC GCTTACTCAC CGAAGTGCCG CTAAGCAGCA CAACGAGCGC 
TTAGAGTTTT TAGGTGATGC CATTTTGGGC ATGATTATAG GCGAGACTTT ATTTAAGCGC 
TTTCCTACTG TGCCAGAAGG CAAGCTCACC AGAATGCGTT CGACCTTGGT TAAAGGTGAT 
ACGCTGGCAG AGTTGGCCAA AGAAGCCAGT GTGGGCGAGT TGCTCAACTT AGGTCCTGGT 
GAACTGAAAA GTGGCGGTCA CCGCAGAAGT TCTATTTTGG CTGACGCCGT TGAAGCTATC 
TTAGGTGCTA TCTACCTCGA TTCAGGAATG GACGAAGTAC GAGGCGTTAT CGACAGGCTA 
TGGGAAAGTC GCATTAATCA ATTAGATCCT AATGCACACC CAAAAGACAG TAAGACGCGC 
CTGCAAGAGT TCTTACAAGG GCGCAAACAG GCGCTGCCAA CCTATGAGGT GCTGTCTATT 
TCAGGCAAAG ATCACGCACA GACATTTGAA GTGTGCTGTA AAGTAGAAAG TCTACCAGAC 
GCGGTTGTGG CGTCTGGCAA TAGTCGTCGT AAGGCAGAAC AAGAAGCTGC TCGTCTAACA 
TTGGAGAAGC TTGATGACAA CGCATGA
 
Protein sequence
MQGIDKYLRL YKAIGYTFNN EALLEQALTH RSAAKQHNER LEFLGDAILG MIIGETLFKR 
FPTVPEGKLT RMRSTLVKGD TLAELAKEAS VGELLNLGPG ELKSGGHRRS SILADAVEAI 
LGAIYLDSGM DEVRGVIDRL WESRINQLDP NAHPKDSKTR LQEFLQGRKQ ALPTYEVLSI 
SGKDHAQTFE VCCKVESLPD AVVASGNSRR KAEQEAARLT LEKLDDNA