Gene MADE_02996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02996 
Symbol 
ID6779015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3250983 
End bp3251621 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID642756447 
Productpyridoxine 5-phosphate oxidase 
Protein accessionYP_002127286 
Protein GI196157797 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.548346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTT CAGATATGCG TAGACAATAC TCAAAAGGTA GTTTGAGTGA GTCAGATATC 
ACATCTAGCC CTTTTTCTTT GTTTGACCAA TGGTTAAAAG ACGCTATCGA TGCGGGTATT 
CCCGACCCTA CAGCGATGAC TGTTGCCACG GTAGACAGCA CCGGCCAACC TTCTCAGCGA 
ATCGTTTTAT TAAAAGATGT TAGCGACAAA GGCTTTGTGT TTTTTACCAA TCTAGGTAGT 
CGAAAAGCGC AGGAGCTATC TGTTAACCCT AAAGTCTCGT GCCACTTTCC ATGGTTTTTT 
ATGGAGCGCC AGGTGCGTGT TTGCGGCAGT GTAGAGAAAC TGTCTGTTTC TGAAAATGCA 
GCGTATTTCT TCTCTCGTCC GAAAGACAGT CAGCTCGCGG CTTACGCATC TAAACAAAGT 
AAACCCATTG GGAGTAGAGC GCTACTTCTC ACGCAGTTTA AGCAGTTGAA AGACAAGTTT 
GCTAACAAAG CGCTACCTGT ACCTGACTTT TGGGGAGGCT TTCGAATTGT TCCCCATCAA 
ATTGAGTTTT GGCAAGGCGG GGAAGATAGA CTTCACGACC GTTTGGAATA CAACAAAGCC 
GAAGATGGCA GGTGGTCAAC ACAGCGCTTG ATGCCCTAG
 
Protein sequence
MAISDMRRQY SKGSLSESDI TSSPFSLFDQ WLKDAIDAGI PDPTAMTVAT VDSTGQPSQR 
IVLLKDVSDK GFVFFTNLGS RKAQELSVNP KVSCHFPWFF MERQVRVCGS VEKLSVSENA 
AYFFSRPKDS QLAAYASKQS KPIGSRALLL TQFKQLKDKF ANKALPVPDF WGGFRIVPHQ 
IEFWQGGEDR LHDRLEYNKA EDGRWSTQRL MP