Gene MADE_02985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02985 
Symbol 
ID6776532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3237966 
End bp3238427 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID642756436 
ProductProtease subunit of ATP-dependent Clp protease 
Protein accessionYP_002127275 
Protein GI196157786 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000129088 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTCT TAGAAGCTGA AAACCCAGAG AAAGACATTT TCCTATACAT CAACTCACCA 
GGCGGTTCAG TAACTGCTGG TATGGCAATT TATGATACGA TGAGATTTAT CAAGCCAGAT
GTGAGCACGG TATGTATGGG CCAAGCTGCC AGTATGGGTG CATTTCTACT ATCTGCAGGA
GCAAAAGGTA AGCGTTATTG TCTACCTAAC TCGCGCGTAA TGATTCACCA ACCACTTGGT
GGATTCCAAG GTCAGGCGTC TGACTTTGAA ATACATGCGA AAGAAATTCT GTCTATTAAA
GAGAAATTGA ATCGCCTATT GGCAGACCAT ACTGGTCAAG ACTATGAAAA AGTCGCGCGC
GATACAGACC GTGATAATTT CTTGAGCGCA ACTGAGGCAA AAGAATATGG CCTTGTTGAC
CAAGTTTTAG CAAATCGATC TGACGTAGCT GCAACTAAGT AG
 
Protein sequence
MLFLEAENPE KDIFLYINSP GGSVTAGMAI YDTMRFIKPD VSTVCMGQAA SMGAFLLSAG 
AKGKRYCLPN SRVMIHQPLG GFQGQASDFE IHAKEILSIK EKLNRLLADH TGQDYEKVAR
DTDRDNFLSA TEAKEYGLVD QVLANRSDVA ATK