Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02984 |
Symbol | |
ID | 6778984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3236852 |
End bp | 3237892 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756435 |
Product | ATP-dependent protease ATP-binding subunit |
Protein accession | YP_002127274 |
Protein GI | 196157785 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000600418 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA AGCAAAGCGG TGACGGTGAT AATAAGCTAC TGTACTGTTC GTTTTGTGGC AAAAGCCAAC ACGAAGTAAG AAAGTTAATA GCAGGCCCGT CGGTATTTAT TTGCGACGAG TGTGTTGAGT TATGTAACGA TATCATTCGC GAAGAAATTA AGGAAATCGC GCCTAAGCAA AAGCAGGACG CTTTACCCAA ACCAACCGAA ATTCATGCAC ATCTTGACGA TTACGTAATT GGGCAAGAAC ACGCGAAGAA GGTACTATCA GTAGCGGTTT ACAACCACTA CAAGCGTTTG CGCAATGGCG ATGTTCACGA AGGCGTTGAA TTAGGCAAAA GTAATATTTT GCTTATAGGC CCAACAGGCA GCGGTAAAAC GCTGCTTGCT GAAACCTTAG CGCGTTTACT TGACGTTCCA TTTACTATGG CTGACGCCAC CACGCTTACC GAAGCGGGTT ATGTAGGTGA AGATGTTGAG AACATTATTC AGAAGCTGCT TCAGAAGTGC GACTACGATG TAGAAAAAGC CCAAAGGGGT ATTGTCTACA TCGATGAAAT CGACAAGATT TCTCGTAAGT CTGACAATCC TTCTATTACT CGAGATGTAT CGGGTGAAGG TGTGCAGCAG GCGCTACTTA AGCTAATTGA AGGTACCGTG GCCTCAGTGC CTCCGCAAGG CGGCCGTAAG CATCCACAGC AGGAGTTTTT GCAGGTTGAT ACCTCTAAGA TCCTATTTAT CTGTGGTGGT GCATTTGCAG GGCTTGATAA AGTTATCGAG CAACGCGCAC AAAAAGACAC AGGCATCGGT TTTGGCGCTA CGGTCAAGTC GAAAGACAAC AGCAAACAAA TCAGCGAACT CTTTAAGCAG GTTGAGCCCG AAGATTTGGT TAAATATGGC TTGATACCAG AGTTCATTGG CCGTTTACCT GTTGTAACCA GCCTTGAAGA GTTAAATGAA GACGCACTAA TTCAAATTCT ACGTGAGCCT AAGAACGCAA TTACCAAGCA ATATGGTGCA TTGTTCTCGA TGGAGATGTA G
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Protein sequence | MSDKQSGDGD NKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVELCNDIIR EEIKEIAPKQ KQDALPKPTE IHAHLDDYVI GQEHAKKVLS VAVYNHYKRL RNGDVHEGVE LGKSNILLIG PTGSGKTLLA ETLARLLDVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV ASVPPQGGRK HPQQEFLQVD TSKILFICGG AFAGLDKVIE QRAQKDTGIG FGATVKSKDN SKQISELFKQ VEPEDLVKYG LIPEFIGRLP VVTSLEELNE DALIQILREP KNAITKQYGA LFSMEM
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