Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02983 |
Symbol | |
ID | 6778982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3234376 |
End bp | 3236805 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756434 |
Product | ATP-dependent protease La |
Protein accession | YP_002127273 |
Protein GI | 196157784 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00208912 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGTA AACGGGTGCT CGTGGATATT TATACCGTAG GGACTATTGC TACTATTTTG CAGTTATTAA AGCTGCCTGA CGGTACGGTT AAGGTACTGG TTGAAGGAAG CGTGCGTGGC GAAATAGAAA GCTATAAGCA GTCCGATCCT TTCTTTGTTG CTAATGTCGA TAAGTTAGAA GACGAAGGCA TTGATGAAAG CGAGCAAGAA GTGTTAATTC GCTCGGCGGT TTCGCAGTTT GAAGGCTACG TTAAGCTTAA TAAGAAAATA CCGCCAGAAG TACTGACTTC GCTTAATGGT ATTGAAGATG CAGCGCGTTT AGCTGACACC ATGGCAGCGC ACATGCCGCT GAAACTTACC GAAAAACAAA AAGTGCTTGA GATGCAGGGC GTAAATGAGC GTTTAGAATA CCTCATGGCA CTGATGGAAG GTGAGATTGA TTTGCTGCAG GTCGAAAAGA AAATTCGAAC CCGCGTTAAG AAGCAAATGG AAAAAAGCCA GCGCGAATAT TATTTGAATG AACAAATGAA GGCGATTCAA AAAGAACTCG GTGAGTTAGA TGACGCGCCA GATGAGTTCG AAGCGCTGTC TAAAAAAATT ACCGACGCGA AGATGCCAAA AGAAGCGGAA GACAAAGCGA AAGCAGAGCT TCAAAAGCTT AAGATGATGT CGCCCATGTC GGCGGAAGCT ACCGTACTTC GTAGTTACAT CGAATGGCTG ACCAACGTGC CTTGGAACAA GCGTTCGCCG GTTAAGAAAG ATCTTTCTCG TGCAGAAGGC GTGCTTAATG AAGATCACTA CGGTCTTGAA AAGGTAAAAG AGCGTATTCT TGAATACCTC GCAGTTCAAC AGCGTGTTAA AAAGCTTAAA GGCCCAATTC TGTGCCTTGT AGGTCCTCCA GGTGTAGGTA AAACCTCGTT AGGGCAATCT ATTGCTAAAG CGACTGGACG CAAATATGTA CGTATGGCCC TAGGTGGCGT GCGCGATGAA GCTGAGATTC GCGGTCATAG ACGTACTTAT ATTGGCTCTT TGCCGGGTAA ACTGGTGCAG AAAATGGCAA AGGTTGGCGT AAAAAATCCG CTGTTCTTGT TAGATGAAAT CGACAAGATG TCTTCGGATA TGCGCGGTGA CCCAGCTTCG GCACTACTTG AAGTACTAGA CCCTGAACAA AACAACAGTT TCAGCGATCA CTACTTAGAA GTGGATTACG ACTTGTCTGA CGTTATGTTC GTCGCCACTT CAAATAGTAT GAACATTCCT GGGCCGCTAC TTGATCGTAT GGAAGTGATT CGTCTCTCTG GTTACACCGA AGACGAGAAG CTAAACATTG CGAAGAACCA CTTAATTGGT AAGCAAATGG AGCGTAACGG GCTTAAAGCA AAAGAGCTAG AAATTACTGA CTCTGCTGTT ATTGGTATGA TTCGCTACTA CACCCGAGAA GCAGGTGTGC GTAGTTTAGA ACGCGAAGTG TCTAAAGTCT GTCGCAAGGC CGTGAAAGAT ATCTTGCTTA AGAAGAGCAA AGATAAATTC TACAAATCAG CGATAGACTT AGCGCCTGAG AATGGTGACA TTGCAAACAG CTATGGTACG TTTAAGTGTC AAAACGGGGA ATACGATAAA GCTAAAGCTT ATTTCTTTGA TGCTATCAAC AACCGCCTTT ATGCAAATGC AGCGCAAACT TACGAAAACC TTGCGCTATG TGCACAAAGC CAAGGAAAAG TGGATGAGGC GATAGGCTAC CTTCAAGACG CCTTGAAACA CCAACCAGCC CGAGGAAAAA CCCTCTTTCT ATTAAGCGAG CTCTACGCTG TGTCTGAGCA GTGGGGCCTT GCTGAGTCTT CATTGAGTAA ATACGAGCGC GTCGCAAAAA TCACACCTGA CTATTTATGG TTAGCGTATG AAGTTGCCAA AGGCCAAGGG GATCTCGAAG CGGCTAGCGA CTATGGCGAA ATGATGGTTT CGGTGTTTCC CGAAAGTGAA CTGACGAAAC GCTACCTTGT TCAACGAGAT AGTTTGCAAA ATAGGGTCGT TAGAACTGTT AAGTCTTCGC CTGTAAACGA AGTAGAAAGC CAGCAGGCAG GCGCTCAAGT GGAAAAGCAA AAACAGGGCG AAAAGGCAGA GCAATCAACC ACTTCAGAGG CAGAACTTGA TGATGCGGGG GAGCAAAGCC AGCGTGTTGA GCCAAATGAC GATGAGCAAA CTACAACTTC AACATCCCCT TCAGATAACG AACAAAAGCA AAATATTGAA TTATCTGAGC AAAGTGACAA ATTCCATGTA GTAAAAGAAG GTGAAAACTT ATATCGTATT TCTTTATTGC ACAATATCAA AATGGCAACA CTGCTAAAGT GGAATAACCT AGAAAATACT GGCGCTATTA TTGCTGGTCA GACGCTTTGG TTAGTACCAC CGAATATGCA GGAGGAATAA
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Protein sequence | MERKRVLVDI YTVGTIATIL QLLKLPDGTV KVLVEGSVRG EIESYKQSDP FFVANVDKLE DEGIDESEQE VLIRSAVSQF EGYVKLNKKI PPEVLTSLNG IEDAARLADT MAAHMPLKLT EKQKVLEMQG VNERLEYLMA LMEGEIDLLQ VEKKIRTRVK KQMEKSQREY YLNEQMKAIQ KELGELDDAP DEFEALSKKI TDAKMPKEAE DKAKAELQKL KMMSPMSAEA TVLRSYIEWL TNVPWNKRSP VKKDLSRAEG VLNEDHYGLE KVKERILEYL AVQQRVKKLK GPILCLVGPP GVGKTSLGQS IAKATGRKYV RMALGGVRDE AEIRGHRRTY IGSLPGKLVQ KMAKVGVKNP LFLLDEIDKM SSDMRGDPAS ALLEVLDPEQ NNSFSDHYLE VDYDLSDVMF VATSNSMNIP GPLLDRMEVI RLSGYTEDEK LNIAKNHLIG KQMERNGLKA KELEITDSAV IGMIRYYTRE AGVRSLEREV SKVCRKAVKD ILLKKSKDKF YKSAIDLAPE NGDIANSYGT FKCQNGEYDK AKAYFFDAIN NRLYANAAQT YENLALCAQS QGKVDEAIGY LQDALKHQPA RGKTLFLLSE LYAVSEQWGL AESSLSKYER VAKITPDYLW LAYEVAKGQG DLEAASDYGE MMVSVFPESE LTKRYLVQRD SLQNRVVRTV KSSPVNEVES QQAGAQVEKQ KQGEKAEQST TSEAELDDAG EQSQRVEPND DEQTTTSTSP SDNEQKQNIE LSEQSDKFHV VKEGENLYRI SLLHNIKMAT LLKWNNLENT GAIIAGQTLW LVPPNMQEE
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