| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02971 |
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| Symbol | |
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| ID | 6777294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3219079 |
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| End bp | 3220299 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642756422 |
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| Product | Nidogen, extracellular region |
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| Protein accession | YP_002127261 |
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| Protein GI | 196157772 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0698248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTCTCAAGAC TCATAGATGC TTAGCGAAGA GTATACTCAT TACCTCTGTG
GTGCTTGGAA CAGGTAGTGC AATGGCTGCT CCAATATCCT TGATAAACCA AGGCTTCGAA
ACTGGTGATT TAAGTGGTTG GGATACGATC GGTCAAGTTG TAGCAGCAGG TCCTACAACT
GTTGTAACAA ATAATGGTAC TAACTATTTA ATCTCCCCAA ACGAATCAAG TATGGCATTC
ATGGACTCTT TTGGTGCGAG TGTTTCCGAG ATAGAAAGTT TTTTCGGCAT TGCTAGTGGA
AGTTTCAACG CTACTCAGAC CCCATTTGGA AATAGTTCTT TAACTAATGG TTCAGCTATT
TCTCAAAGCT TTGTAGCCAG TGCCGGTGAC ACTATTGATA TGTCATGGAA TTATGCGGCC
CGTGACTATA TTCCTTTTAC TGACCCTTCC TTTGCTGTAT TGATTGCTCC CGATGGAACA
ACTCAGATTG AAACTTTAGC GAGCACTACT GGTCCAGGGC TAGCAACGGG TTCAGATGGC
ATTTCTGGAG TTTTCTCTTT TGCAGAAGAA CTTAGTCAAG ATGGTGAATA TACAATTGGT
TTTGCTGTGA CCAATTCTTC AGACACTATT CTTAACGCAA CTTTATTTTT AGATGATGCA
GCAGGCGAAT GTAACCCTTC TTGCAATGAA TTGGGGTCTC CTGAGAATCC TTTATTGCCT
GAAGAGGATG ACACACCAGA TTCCTTTGAC TTTTCGTTTA CAGTGACGGA ACCATCATTT
CCTATATTTA TAGATCCTAT AGTTGCAGTC GGCTATGACT ATGTTGTAAA TAGTGGTCCA
AACGTCGCTA GCGTAATCTT GCCAGAAATC GGAGATGGTA TATTTGATGT ATACGGCTGG
GATGGCTCTG ACTACAATCT ATTCTTAGGA GAGGCACTTG CTAACATAGC TTTTGACTTT
GAACCCGACG GAGTTTCCCA GTTTCAAGTA AAGGGTATAG AAGTAGAAGA AATGCTAGAC
CCGAGTGATC CTGCAGCATT TATAACAGGC TTGACGTTCG TTGAGGCAGG GGATGTGGAT
ATAAGTCAGA TTGCTATAAC GATTGATACG GATGATCTAG TTGATGTGCC GGCTCCATCA
TCTTTAGGGT TACTAGGTAT ATCTCTAATA ATGATGCGTA GTATCCGTAA GAAAGCTTCT
ATTTCGTTTA TGAATAAATA A
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| Protein sequence | MKKFLKTHRC LAKSILITSV VLGTGSAMAA PISLINQGFE TGDLSGWDTI GQVVAAGPTT
VVTNNGTNYL ISPNESSMAF MDSFGASVSE IESFFGIASG SFNATQTPFG NSSLTNGSAI
SQSFVASAGD TIDMSWNYAA RDYIPFTDPS FAVLIAPDGT TQIETLASTT GPGLATGSDG
ISGVFSFAEE LSQDGEYTIG FAVTNSSDTI LNATLFLDDA AGECNPSCNE LGSPENPLLP
EEDDTPDSFD FSFTVTEPSF PIFIDPIVAV GYDYVVNSGP NVASVILPEI GDGIFDVYGW
DGSDYNLFLG EALANIAFDF EPDGVSQFQV KGIEVEEMLD PSDPAAFITG LTFVEAGDVD
ISQIAITIDT DDLVDVPAPS SLGLLGISLI MMRSIRKKAS ISFMNK
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