| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02951 |
|---|
| Symbol | |
|---|
| ID | 6778037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3198680 |
|---|
| End bp | 3199690 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642756400 |
|---|
| Product | Phage integrase |
|---|
| Protein accession | YP_002127241 |
|---|
| Protein GI | 196157752 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.203842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATA AACCGACCAA ATTAGCTACT GACTTATCGT TACGTAATGA TGAGCCAGGT
CAGATTGCCC GCCAGGACTC CGAAGCGCTG CGTCATTACC TCCAGGCAGC CACCTCCGAC
AACACCCGCA AGGCGTATCG GTCGGCCATC CGACAGTTTG AAAAATGGGG TGGGCGTCTG
CCCACGGATC GGGATACGCT AATTCGTTAT CTGCTGGCCC GTGCGGAGTC GCACAACTCT
CGAACCCTGG ATCTCCATTT GACGGCTATC AGCCAGTGGC ACCACTACCA GGGCATCATT
GACCCGGTGA AAGATCCGCT CGTTCGAAAA ACAATGGAGG GCATTCGACG TACCCATGGC
CTGCCCAAAC GCAAAGCCAA GGCACTGCGC CTGTCGCACA TTGCGCAGAT GGTGGATCAC
CTGAGGCATT TGCCAGACTG TAAAAAGAAA TGTAGAGATA TTGCATTGGT GTTGACTGGC
TTTTTCGGTG CCTTTCGCCG CAGTGAACTG GTCAAAGTGC AGGTTAGTGA TCTGGTGTGG
GAACCGGAGG GGCTGATCAT CAAGTTACCC CGTTCCAAAA CTGACCAACA GGCGATGGGT
TTGATACGAG CTTTACCCTT TGGTGAGCAA AGCTGCTGTG CTGCGACGGC AGTTAAAGTG
TGGATGGAAA CGGCAGGCAT TGACGAAGGG CCACTCTTTC GACCAGTAAA CCGATGGGAC
CAGGTTCAAG CAAGACAACT AAATCCGGGC GCGATTAACG ACTTGCTCAA GTCTTTGGGC
AAAGCCTGTC GCTTCGATTT TGTGCCGGAT CTAAGCAGCC ATAGCTTTCG TCGAGGTTTG
TCCACCTCAG CAGCTCGCGA GCGTATAGAC TTTGAACTGA TCAAAAAGCA AGGTGGCTGG
AAAAGCGATG CCACCGTGTG GGAATACATC GAAGAAGGAC AGCAATTGTC CGAAAATGCC
TCTTTGATAC TTATGGAAAA GATGGCAGCG ATGATTTCAA CTGATAGCTA A
|
|---|
| Protein sequence | MINKPTKLAT DLSLRNDEPG QIARQDSEAL RHYLQAATSD NTRKAYRSAI RQFEKWGGRL
PTDRDTLIRY LLARAESHNS RTLDLHLTAI SQWHHYQGII DPVKDPLVRK TMEGIRRTHG
LPKRKAKALR LSHIAQMVDH LRHLPDCKKK CRDIALVLTG FFGAFRRSEL VKVQVSDLVW
EPEGLIIKLP RSKTDQQAMG LIRALPFGEQ SCCAATAVKV WMETAGIDEG PLFRPVNRWD
QVQARQLNPG AINDLLKSLG KACRFDFVPD LSSHSFRRGL STSAARERID FELIKKQGGW
KSDATVWEYI EEGQQLSENA SLILMEKMAA MISTDS
|
|---|
| |