| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02946 |
|---|
| Symbol | |
|---|
| ID | 6778494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3192586 |
|---|
| End bp | 3193887 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642756395 |
|---|
| Product | NADP-specific glutamate dehydrogenase |
|---|
| Protein accession | YP_002127236 |
|---|
| Protein GI | 196157747 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT CCAACGACCA AAGCTTCGGT GACGACGGTC ACCTGAACGG GATTTTTGAC
CAACTTGACG TCCCTGAGGA CGTTCGCAGG CGTCTGGCCC AGGCGCAGCA AACCGTACAA
ATCAACATCC CGATCCGCAT GGACGACGGC GCCTTGCAAT TCTTTCCGGC CTGGCGCATT
CGTTACGACG ACACGCGTGG GCCGGGCAAA GGGGGCATCC GTTTCCATCC GGACGTGAGC
TCGGAAGAAG TCACTGCGCT GAGCTTCTGG ATGACCATCA AGTGCGCCGT GGTGGACCTG
CCATTCGGCG GTGCCAAAGG TGGTGTTCGG GTCGATCCCA AGGCGCTCTC CCGACTGGAA
CTGGAACGTC TGTCGCGTGG CTATATCCGC GCTTTTCATG ACCTTATCGG GCCGAACAGT
GACATCCCGG CACCGGACGT CAACACCAAC GACACCATCA TGGGCTGGAT GGCCGACGAA
TTTGCCCAGA TCGAACGCCG TCAGGTACCG GCCACCATCA CCGGCAAGCC TTTAGGGCTG
GGCGGTTCCA GGGGACGCAC CGCGGCCACC GGACGTGGCG CGCTGCAGGT GCTTGATCTG
TGGGCCGAGC GCCGCGGCAA AACCCCTGAA GAACTCCGTG TGGCGGTCCA GGGTTTCGGC
AATGCCGGTT ATCACTTCGC CCGACTGGCC CGCGAGCGCG GCTATCGGAT CGTCGCGCTG
TCGGATTCCC AGGGTGCCAT TCATGCCGCT GACGGACTTG ATCCAGACCC GATCTGGCGC
CATAAACACA AAAACCGGGA GCTCAAGGGC ATGGTTTACT GTGATGAATC GATCTGCCAG
GAAGCCGACG TCGAGCAACT GACCAACGAC GAGCTGCTGG CGATGGATGT CGATGTACTG
GTACTAGCCG CACTGGAGGA CGCCGTCACC GAGCAAAATG CCGCGACCGT GAACGCCGCC
ACGATCCTGG AAATCGCCAA CGGGCCCGTC AGTAATGAGG CCGATGATCA ACTAGCCAAA
CGCGGCGTCG AAGTGCTACC GGATGTATTG GTCAATGCCG GCGGTGTGAT CGTCAGCCAT
CTGGAATGGG TGCAGAATCG CATCGGTGAT ACCTGGTCCG AAGACGAAGT CAATCGGCGC
CTCACCGAAC GCCTGGCCCG CGAGGCCGCC GCCTGTTTCG ACCGGGCGGA GGAAGATAAC
ATAACGCTGC GGACTGCGGC CTATACACAG GCCATCGGCC GCATCGCCGA GGCCATGACC
CAACAAGGCA CTCAGGGCTA TTTCAACCAT CATCAAGGAT AG
|
|---|
| Protein sequence | MSHSNDQSFG DDGHLNGIFD QLDVPEDVRR RLAQAQQTVQ INIPIRMDDG ALQFFPAWRI
RYDDTRGPGK GGIRFHPDVS SEEVTALSFW MTIKCAVVDL PFGGAKGGVR VDPKALSRLE
LERLSRGYIR AFHDLIGPNS DIPAPDVNTN DTIMGWMADE FAQIERRQVP ATITGKPLGL
GGSRGRTAAT GRGALQVLDL WAERRGKTPE ELRVAVQGFG NAGYHFARLA RERGYRIVAL
SDSQGAIHAA DGLDPDPIWR HKHKNRELKG MVYCDESICQ EADVEQLTND ELLAMDVDVL
VLAALEDAVT EQNAATVNAA TILEIANGPV SNEADDQLAK RGVEVLPDVL VNAGGVIVSH
LEWVQNRIGD TWSEDEVNRR LTERLAREAA ACFDRAEEDN ITLRTAAYTQ AIGRIAEAMT
QQGTQGYFNH HQG
|
|---|
| |