| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02939 |
|---|
| Symbol | |
|---|
| ID | 6778800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3185625 |
|---|
| End bp | 3185909 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642756388 |
|---|
| Product | GGDEF:EAL:Histidine kinase, HAMP region |
|---|
| Protein accession | YP_002127229 |
|---|
| Protein GI | 196157740 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.900093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGCC TTAAGCGCGT TGGCGAGTCT TTCTCTCAAT TATTAAACGT ACAAGAGATG
GGCTTAGATT ATGTGAAGAT TGATTCTGCT TTTATGGCGG ACATCGACTT TAATCCCGCC
AATCACGCAT TTATCAGAGG CTTCTGCTCG TTAGCTCACA CCTTTGGTAT TAATGTATAC
GCTGATGGCG TTAAACGTGC TGATCACCAA GATTTATTTA TCGAGCTTGG TATTGACGGG
GTGGTTTCTC ATATTGAGGT TATAGAGCAT CTTTTAGATG ACTAA
|
|---|
| Protein sequence | MIGLKRVGES FSQLLNVQEM GLDYVKIDSA FMADIDFNPA NHAFIRGFCS LAHTFGINVY
ADGVKRADHQ DLFIELGIDG VVSHIEVIEH LLDD
|
|---|
| |