| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02938 |
|---|
| Symbol | |
|---|
| ID | 6778813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3184069 |
|---|
| End bp | 3185253 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642756387 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_002127228 |
|---|
| Protein GI | 196157739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCA TAAGCAGAAC AACTCTGGCG AAATTTTTTA ATATTGCTGT GGCGGTAGTT
TGCCTATTAG TTTTTTTTAT TGGGCAAGCG CATGCCGCGT GGTATGAGGC CACGGGGCAA
GCAGTTGTGC TAGATGGTAA TAAAGAAGCA GCTAAACGCA CGGCCACGCA AGAAGCGTTA
AAACAAGCAA TGCTGTTTGC CGGCGCTTCA GTGCACAGTG TTGCCAAACT CACCAATGGA
TTGCTTAAAA ACGAAGAAAT GACAATCCGC TCTACCGGCG AAGTTAATCA GCTTGAGCTA
GTTAACGAAA CCTTTAACGG TGAGGTAATT ACCGTGCGTG TCCGAGCCGA TATTTTTCCT
AAAGGTAAGA CGTGCGATGC ACAGCTTGAT GAGAAACACT TCGCCACTAC ACACTTTAGA
ATTAGAAATA GAGGTCATTT GACCCATGGC AATATGCCTA ATTTCGACAA AGCTTTCACT
CAGCGACTCG TAGAGGCAAT GAAAGCTCAA ACCAACAACC TTAGCATTAC TTATGTTGCA
CCTCATACGG CAAAATTTGA CAGCCGGTTT ACCGCAGAGA ATATACGCAC CCTATCGGCC
CAAAGTAACA CTCAGTTTGT GATTATTGGT GTTATCGACG ATTTAAGTAT GGGCCCAAAA
GATACCCCGC CTGTGTTTAC ACCGTGGCGT GATAGTACAC CAGAGCGCGC GTTCTCAATG
TCACTTCAGG TTTATGATGG AATAAATGGG GGCCTGCTTT ATACCTCGTC GTATAGAAAC
CAAGAAGAAT GGACGTTTGA CAGATTCGAA GATGTTGATG AGTTTTCGTC AACCTTTTGG
CAGTCCCGCT ATGGTCAAGC CATTGACGTA AGCATCAGCG AGGCAATAGA AGACATCAAA
GAATCCACTG CTTGCCAGCC TATAACAGGT AGGGTAATTA GCGTTGCGAA CAACAAAATT
TCAATTTCTT TAGGGAGAGA TAATGGCATT TCTGAGAAAG ATGAACTATA TCTTTATCAA
GCTAAAGAAG TAATAGATAA CCTTGGCAGG ACGTACCTTC AGTATGCTGT CTACCCTGGC
ACGTTTATTG TCGACCGTGC CTTTGGCAAT TCATCAACGG TGGTAAACAC AGGTACAGGC
GTTATCGCGA ACATCCAAGA AAACGATTTT GTAGTAAAAA AATAA
|
|---|
| Protein sequence | MQRISRTTLA KFFNIAVAVV CLLVFFIGQA HAAWYEATGQ AVVLDGNKEA AKRTATQEAL
KQAMLFAGAS VHSVAKLTNG LLKNEEMTIR STGEVNQLEL VNETFNGEVI TVRVRADIFP
KGKTCDAQLD EKHFATTHFR IRNRGHLTHG NMPNFDKAFT QRLVEAMKAQ TNNLSITYVA
PHTAKFDSRF TAENIRTLSA QSNTQFVIIG VIDDLSMGPK DTPPVFTPWR DSTPERAFSM
SLQVYDGING GLLYTSSYRN QEEWTFDRFE DVDEFSSTFW QSRYGQAIDV SISEAIEDIK
ESTACQPITG RVISVANNKI SISLGRDNGI SEKDELYLYQ AKEVIDNLGR TYLQYAVYPG
TFIVDRAFGN SSTVVNTGTG VIANIQENDF VVKK
|
|---|
| |